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Conserved domains on  [gi|1824669243|ref|YP_009740715|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Euparatettix variabilis]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 14-90 1.35e-13

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 60.17  E-value: 1.35e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669243 14 SGLYIFSSFRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFLIIFLIFSVCEGALGLSVLVSLIRSCGNDYVFS 90
Cdd:MTH00162  13 SGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 14-90 1.35e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 60.17  E-value: 1.35e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669243 14 SGLYIFSSFRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFLIIFLIFSVCEGALGLSVLVSLIRSCGNDYVFS 90
Cdd:MTH00162  13 SGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
22-88 3.65e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 36.39  E-value: 3.65e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669243 22 FRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVD--YFLIIFLIFSVCEGALGLSVLVSLIRSCGNDYV 88
Cdd:pfam00420 19 LRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 14-90 1.35e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 60.17  E-value: 1.35e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669243 14 SGLYIFSSFRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFLIIFLIFSVCEGALGLSVLVSLIRSCGNDYVFS 90
Cdd:MTH00162  13 SGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-96 1.07e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 45.61  E-value: 1.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669243  1 MSLLLLFFFLIFFSGLYIFSSFRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFLIIFLIFSVCEGALGLSVLVSLI 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLI 81

                         90
                 ....*....|....*.
gi 1824669243 81 RSCGNDYVFSSSLFVC 96
Cdd:MTH00149  82 RLHGNDYVSSLSSLKF 97
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 15-96 3.76e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 41.50  E-value: 3.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669243 15 GLYIFSSFRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFLIIFLIFSVCEGALGLSVLVSLIRSCGNDYVFSSSLF 94
Cdd:MTH00188  16 GLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLNLI 95


                 ..
gi 1824669243 95 VC 96
Cdd:MTH00188  96 KC 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-96 1.19e-04

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 37.42  E-value: 1.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669243  1 MSLLLLFFFLIFFSGLYIFSSFRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVD-YFLIIFLIFSVCEGALGLSVLVSL 79
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANQVNgMLAIVLLTFGACEASLGLSLLVLM 80

                         90
                 ....*....|....*..
gi 1824669243 80 IRSCGNDYVFSSSLFVC 96
Cdd:MTH00013  81 TRSYGNDMLKSLTSNKC 97
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 22-96 1.42e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 37.22  E-value: 1.42e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669243 22 FRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFL--IIFLIFSVCEGALGLSVLVSLIRSCGNDYVFSSSLFVC 96
Cdd:MTH00107  22 YRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMmpIILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
22-88 3.65e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 36.39  E-value: 3.65e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669243 22 FRKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVD--YFLIIFLIFSVCEGALGLSVLVSLIRSCGNDYV 88
Cdd:pfam00420 19 LRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 23-96 5.34e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 35.73  E-value: 5.34e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669243 23 RKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFL--IIFLIFSVCEGALGLSVLVSLIRSCGNDYVFSSSLFVC 96
Cdd:MTH00067  23 RTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVATTRTHGTDHLKNLNLLQC 98
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 23-96 8.00e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 35.21  E-value: 8.00e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669243 23 RKHLLLMLLGLECMVLSVFYYIFLYLSFFGYVDYFL--IIFLIFSVCEGALGLSVLVSLIRSCGNDYVFSSSLFVC 96
Cdd:MTH00125  23 RTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLLQC 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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