|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
2.68e-157 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 452.30 E-value: 2.68e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIVNFWWLVHSLMFVVSFFFMLGVYSYSDLNMISWFFGVDFFSFGLILLSFWICSLMITASSSVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 81 LSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 161 VYDCSHTLYFPLLFDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 241 LGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 321 IYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1824665963 401 YSQHGSYYGGVYTCSLGYVREYHLLLLHWLPLNILCLKGEYFFF 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
26-443 |
4.87e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 327.95 E-value: 4.87e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 26 SLMFVVSFFFMLGVYSYsdlnmiswFFGVDFFSFGLILLSFWICSLMITASSSVYLSSYHSSIFIFMVLFLMIMLYCSFS 105
Cdd:MTH00150 2 SLLLLYSSFSSYESLSE--------LFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 106 SLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVL---FKVYDCSHTLYFPLLFDFGSFYFL 182
Cdd:MTH00150 74 VSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVIlwmSSSYGSSFMLLISSLRKLLSSMGL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 183 FYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSF 262
Cdd:MTH00150 154 WGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 263 ICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPS 342
Cdd:MTH00150 234 ICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 343 MALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAVYTLYMYSYSQHGSYYGGVYTCSLGYVREY 422
Cdd:MTH00150 314 LSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEM 393
|
410 420
....*....|....*....|.
gi 1824665963 423 HLLLLHWLPLNILCLKGEYFF 443
Cdd:MTH00150 394 LLLLLHWVPLLLLILKSDLLF 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-406 |
8.59e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 328.62 E-value: 8.59e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIVNFWWLVHS---LMFVVSFFFMLGVYSYSDLNMISWFFGVDFFSFGLILLSFWICSLMITASS 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 78 SVYLSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 158 LFKVYDCSHTLYFPLL-FDFGSFYF--LFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 235 MSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 315 FCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410
....*....|..
gi 1824665963 395 TLYMYSYSQHGS 406
Cdd:MTH00014 401 SLFLYTSTQHGS 412
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
8.48e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 315.77 E-value: 8.48e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIVNFWWLVHSLMFVVSFFFMLGVYS-YSDLNMISWFFGVDFFSFGLILLSFWICSLMITASSSV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNsFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 80 YLSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 160 KVYDCSHTLYFPLLFDFGSFYFLFYLFII---LAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWIflmLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 237 VISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 317 LSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1824665963 397 YMYSYSQHGSYYGGVYTCSLGYVREYHLLLLHWLPLNILCLKGEYFFF 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
8.55e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 313.67 E-value: 8.55e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIV--NFWWL---VHSLMFVVSFFFMLGVYSYSDLNMISWFfGVDFFSFGLILLSFWICSLMITA 75
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSkpKFLWTnttTYSLLIALLSLQWLKPPYYPTKNLTQWL-GIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 76 SSSVYLSSYHSS--IFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLP 153
Cdd:MTH00124 80 SQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 154 LLLVLFKVYDCSHTLYFPLLFDFGSF------YFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 228 GYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGH 307
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 308 GLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFL 387
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410
....*....|....*...
gi 1824665963 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00124 400 TLITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
3.61e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 299.14 E-value: 3.61e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLF---MLIFMTPLCLIVNFWWLVHSLMFVVSFF-FMLGVYSYSDLNMISWFFGVDFFSFGLILLSFWICSLMITAS 76
Cdd:MTH00068 1 MLKIIIptlMLLPTTWLSPKKWLWTLTTTNSLIIAFLsLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 77 SSvYLSS---YHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLP 153
Cdd:MTH00068 81 QN-HLKNepiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 154 LLLVLFKVYDCSHTLYFPLLFDFGSFYF------LFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLmtytnkIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 228 GYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 308 GLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410
....*....|....*...
gi 1824665963 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRG 417
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-406 |
4.00e-93 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 288.80 E-value: 4.00e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIVNFWWLVHSLMFVVSFFFMLGVY-----SYSDLNMISWFFGVDFFSFGLILLSFWICSLMITA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFllnnhWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 76 SSSV--YLSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLP 153
Cdd:MTH00044 81 SINHlsNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 154 LLLVLFKVYDCSHTLYFPLLF------DFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 228 GYGVFRVMSVISFLGLSF-NYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIG 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 307 HGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420
....*....|....*....|
gi 1824665963 387 LSFFSAVYTLYMYSYSQHGS 406
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGS 420
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-422 |
7.05e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 282.60 E-value: 7.05e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 5 LFMLIFMTPLCLIVNFWWLVHSLMFVVSFFFMLGVYSYSDLNMISW--FFGVDFFSFGLILLSFWICSLMITASSSVYLS 82
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSnlYLSYDPLSSPLVILSCWLLPLMFLASQNHMKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 83 SYHS--SIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFK 160
Cdd:MTH00206 86 EPINrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 161 VYDCSHTLYFPLL---FDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSV 237
Cdd:MTH00206 166 LQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 238 ISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 318 SNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420
....*....|....*....|....*
gi 1824665963 398 MYSYSQHGSYYGGVYTCSLGYVREY 422
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREH 430
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
1.70e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 279.47 E-value: 1.70e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIVNFWWL-----VHSLMFVVSFFFMLGVYSYSDLNMISWFFgVDFFSFGLILLSFWICSLMITA 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 76 SSSVYL--SSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLP 153
Cdd:MTH00110 80 SQHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 154 LLLVLFKVYDCSHTLYFPLL------FDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLqlwaqpLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 228 GYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGH 307
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 308 GLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFL 387
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420
....*....|....*....|
gi 1824665963 388 SFFSAVYTLYMYSYSQHGSY 407
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKL 419
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
7.71e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 254.50 E-value: 7.71e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIVNFWWL-----VHSLMFVVSFFFMLGVYSYSDLNMISWFFGVDFFSFGLILLSFWICSLMITA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 76 SSSVYLSSYHSS--IFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 154 LLLVLFKVYDCSHTL------YFPLLFDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 228 GYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 308 GLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410
....*....|....*...
gi 1824665963 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRG 418
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-358 |
6.28e-51 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 179.12 E-value: 6.28e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 48 ISWFFGVDFFSFGLILLSFWICSLMITASSSVylSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNE--IKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 128 LGWGYqPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLL------FDFGSFYFLFYLFIIlAFLIKMPMFLVH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAelaaapLPLTAQLLLFLAFFI-AFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 202 LWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMsvisfLGL------SFNYFWLALGLSGGVLVSFICFRQVDLKSLIA 275
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA-----LPLfpeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 276 YSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNM 355
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
...
gi 1824665963 356 AAP 358
Cdd:COG1008 385 GLP 387
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-388 |
1.00e-49 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 170.57 E-value: 1.00e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 113 YIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDFGSFY------FLFYLF 186
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssglLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 187 IILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSFICFR 266
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLS-NIIYERLGSRSLLINSGMINLMPSMAL 345
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1824665963 346 WWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLS 388
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
7.21e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 165.87 E-value: 7.21e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 52 FGVDFFSFGLILLSFWI--CSLMITASSSVYLSSYhssiFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 130 WGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDF-----GSFYFLFYLFIILAFLIKMPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 205 PSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGL-SFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAqNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 284 MVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 1824665963 364 LGELGLLNSIISWSSLTFLTLIFLSFFSAVYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-399 |
3.11e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 163.70 E-value: 3.11e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 53 GVDFFSFGLILLSFWICsLMITASSSVYLSSYhssiFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGY 132
Cdd:MTH00204 83 GVSLFFILLTTLLIPIC-ILISWKSIKFLFKE----FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 133 QPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTL-YFPLLFDFGSFYFLFYLFI--ILAFLIKMPMFLVHLWLPSAHV 209
Cdd:MTH00204 158 REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQAHV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 210 EAPISGSMILAGVLLKLGGYGVFRVMSVIsFLGLSFNYFWLALGLSGGVLV--SFICFRQVDLKSLIAYSSVAHMSMVIG 287
Cdd:MTH00204 238 EAPVAGSVILAGILLKLGGYGFLRFSWPL-FPAASEYFAPLIVMLSVIAVIygSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 288 GLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGEL 367
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEF 396
|
330 340 350
....*....|....*....|....*....|..
gi 1824665963 368 GLLNSIISWSSLTFLTLIFLSFFSAVYTLYMY 399
Cdd:MTH00204 397 FSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-344 |
1.27e-44 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 162.29 E-value: 1.27e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 48 ISWFFGVDFFSFGLILLSFWICSLMITASSSVYLSSYHSsifiFMVLFLMI--MLYCSFSSLSLLSFYIFFEASLIPTLL 125
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKF----YMAALLWLegGVIGVFAALDLLLFYVFFEAMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 126 LILGWGYqPERLQAGIYLIFYTLIASLPLLLVLFKVY----DCSHTLYFPLL----FDFGSFYFLFYLFIIlAFLIKMPM 197
Cdd:PRK05846 150 LIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIADLlnlpLPPGVQYWLFLAFFI-AFAVKMPM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 198 FLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMsvisfLGL------SFNYFWLALGLSGGVLVSFICFRQVDLK 271
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-----LPLfpdashEFAPIIITLGVIAIIYGALVALAQTDIK 302
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824665963 272 SLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMA 344
Cdd:PRK05846 303 KLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLA 375
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
1.03e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 159.45 E-value: 1.03e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 89 FIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTL 168
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 169 YFPLL----FDFGSFYFLFYLFIiLAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRV-MSVISFLGL 243
Cdd:MTH00217 191 DYQALcclkIEKELQYFIFLGFF-LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 244 SFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00217 270 YFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824665963 324 RLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAVYTLYMY 399
Cdd:MTH00217 350 RHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
4.23e-43 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 157.79 E-value: 4.23e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 48 ISWFFGVDFFSFGLILLSFWICSLMITASSSVYLSSYHSSIFIFMVLFLMIMlyCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVI--GVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 128 LGWGyQPERLQAGIYLIFYTLIASLPLLL-VLFKVYDCSHTLYFPLL----FDFGSFYFLFYLFIIlAFLIKMPMFLVHL 202
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLaILGLYFLGGGTFDLLELlnlpLPFGVQTWLFLAFFI-AFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 203 WLPSAHVEAPISGSMILAGVLLKLGGYGVFRV-MSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAH 281
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 282 MSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSL 361
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 1824665963 362 NLLGELGLLNSIISWSSLTFLTLIFLSFFSAVYTLYMY 399
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
33-419 |
2.98e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 143.12 E-value: 2.98e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 33 FFFMLGVYSYSDLNMISWFFGVDFF-SFGLILLSFwicsLMITASSSVYLSSYHSSIFIFMVLFLMIMLyCSFSSLSLLS 111
Cdd:MTH00094 12 FFLFLMFFSFLMFNNYSWSGLFFFFdSFVFVLLIF----MMVFILGLVLLSEKNFNLLILSNLLILICL-LFFVSSNMLM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 112 FYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDFGSFYFLfylfiILAF 191
Cdd:MTH00094 87 LYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEMFFIL-----SLSF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 192 LIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLglsFNYFWLALGLSGGVLVSFICFRQVDLK 271
Cdd:MTH00094 162 MMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDSK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 272 SLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLS 351
Cdd:MTH00094 239 SLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVF 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1824665963 352 SSNMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAVYTLYMYSYSQHGSYYGGVYTCSLGYV 419
Cdd:MTH00094 319 LSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-341 |
1.41e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 129.00 E-value: 1.41e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 48 ISWFFGVDFFSFGLILLSFWICSLMITASSSVylsSYHSSIFifmvLFLMIMLYCSFSSLS----LLSFYIFFEASLIPT 123
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLF----YFLMLVLYSAQIGVFlaqdLLLFFLMWELELVPV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 124 LLLILGWGYQpERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPL----LFDF-GSFYFLFYLFIILAFLIKMPMF 198
Cdd:PRK12561 124 YLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 199 LVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRV-MSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYS 277
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824665963 278 SVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMP 341
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-359 |
1.22e-26 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 111.01 E-value: 1.22e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 52 FGVDFFSFGLILLSFwICSLMITASSSVYLSSYHS-SIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGW 130
Cdd:COG0651 72 LVADRLSALFLLLTA-LVALAVLLYSIGYMRHERRgRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 131 GYqPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLL------FDFGSFYFLFyLFIILAFLIKMPMFLVHLWL 204
Cdd:COG0651 151 GT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAF-ALLLVGFGIKAALFPLHFWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 205 PSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVI--SFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHM 282
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824665963 283 SMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-358 |
1.33e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 112.11 E-value: 1.33e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 48 ISWFFGVDFFSFGLILLSFWICSLMITASSSVylsSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 128 LGWGYQpERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPL----LFDFG-SFYFLFYLFIILAFLIKMPMFLVHL 202
Cdd:PRK02546 156 AIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFGlGFQLLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 203 WLPSAHVEAPISGSMILAGVLLKLGGYGVFRV-MSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAH 281
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824665963 282 MSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAP 358
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
50-393 |
6.29e-25 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 106.95 E-value: 6.29e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 50 WFFGVDFFSFGLILLSFWICSLMITASSSVYLSSYhssififMVLFLMIMLYC----SFSSLSLLSFYIFFEASLIPTLL 125
Cdd:CHL00011 78 WRLGIDGLSIGPILLTGFITTLATLAAWPVTRNSR-------LFYFLMLAMYSgqigLFSSRDLLLFFIMWELELIPVYL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 126 LILGWGYQpERLQAGIYLIFYTLIASLPLLLVLFKVydcshTLYFP--LLFDFG---------SFYFLFYLFIILAFLIK 194
Cdd:CHL00011 151 LLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM-----GLYGSnePTLNFEtlanqsypvALEILFYIGFLIAYAVK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 195 MPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRV-MSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSL 273
Cdd:CHL00011 225 LPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKR 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 274 IAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSS 353
Cdd:CHL00011 305 IAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1824665963 354 NMAAPPSLNLLGELGLLNSIISWSSLTFLTLIFLSFFSAV 393
Cdd:CHL00011 385 SLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
5.37e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 101.32 E-value: 5.37e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 48 ISWFFGVDFFSFGLILLSFWICSLMITASSSvylSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 128 LGWGYQpERLQAGIYLIFYTLIASLPLL---LVLFKVYDCSHTLYFPLLFDF--GSFYFLFYLFIILAFLIKMPMFLVHL 202
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILvsfLGLVWLSGASSFDYEPLRSHTlpLSTQLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 203 WLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSFIC-FRQVDLKSLIAYSSVAH 281
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1824665963 282 MSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMIN 338
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-359 |
5.21e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 86.09 E-value: 5.21e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 52 FGVDFFSFGLILLSFWICSLmiTASSSVYLSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIA--ALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 132 YQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLL---FDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAH 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagaLAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 209 VEAPISGSMILAGVLLKLGGYGVFRVMSVI----SFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824665963 285 VIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK08375 310 ILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-357 |
4.75e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 83.22 E-value: 4.75e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 48 ISWFFGVDFFSFGLILLSfwiCSLMITASSSVYLSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 128 LGWGYQpERLQAGIYLIFYTLIASLPLLLVLFKV----------YDCSHTLYFPLlfdfgSFYFLFYLFIILAFLIKMPM 197
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIvwlsgstsfdYDAISTQNLSL-----NTQLILLTGLLLGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 198 FLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMsvisfLGL---SFNYFWLALGLSGGVLV---SFICFRQVDLK 271
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG-----LQLfpqTWSLVAPGLAIIGTISViygALSAIAQKDIK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 272 SLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLS 351
Cdd:PRK07363 297 RMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLV 376
|
....*.
gi 1824665963 352 SSNMAA 357
Cdd:PRK07363 377 LAGMAS 382
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
20-343 |
1.57e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 81.12 E-value: 1.57e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 20 FWWLVHSLMFVVSFFFMLGV--YSYSDLNMISWFFGVDFFSFGLILLSFWICSLMItaSSSVYLSSYHSSIFIFMVLFLM 97
Cdd:MTH00062 7 GFFLGFLLLLLFCLLYSSGVgcCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQ--VMFYNLLSGVSRFFLFLSLIFS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 98 IMLYCSFSSLSLlsfYIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDFG 177
Cdd:MTH00062 85 ILCFCVNNSLLF---WFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 178 SFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLsFNYFWLALGLSGG 257
Cdd:MTH00062 162 SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCCLFSVF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 258 VLVSfiCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMI 337
Cdd:MTH00062 241 FLIT--ACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGI 318
|
....*.
gi 1824665963 338 NLMPSM 343
Cdd:MTH00062 319 NGSLVL 324
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
144-359 |
2.91e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 77.70 E-value: 2.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 144 IFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVL 223
Cdd:PRK12667 186 FLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLV 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 224 LKLGGYGVFRVMSVISFLGLSFNYFWLA-------LGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWG 296
Cdd:PRK12667 266 VNVGAYAIIRFLYTIFGISPSLIDFRAAlspiliiLGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLG 345
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824665963 297 CMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK12667 346 LAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPP 408
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
186-352 |
6.24e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.43 E-value: 6.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 186 FIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVIS-FLGLSF-NYFWLALGLSGGVLVSFI 263
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAAFF 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSM 343
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLT 378
|
....*....
gi 1824665963 344 AlWWFLLSS 352
Cdd:PRK06458 379 G-WGLMLGA 386
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
1.72e-12 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 63.70 E-value: 1.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 1 MLKYLFMLIFMTPLCLIVNFWWL-----VHSLMFVVSFFFMLGVYSYSDLNMISWFFGVDFFSFGLILLSFWICSLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*....
gi 1824665963 76 SSSVYLSS--YHSSIFIFMVLFLMIMLYC 102
Cdd:pfam01059 81 SQKHLKSEpnNRQRTFIFLLILLQLFLIL 109
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
28-341 |
2.54e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.87 E-value: 2.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 28 MFVVSFFFMLGVYSYSDLNMISWFFGVDFFSFGLILLS----FWICSLMITASSSVYLSSY---HSSIFIFMVLFLMIML 100
Cdd:PRK08668 32 NALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHlswfFAMISLLVIFSVAFFMVSEktkNDAYFNMFALMSLAGV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 101 YCSFSSLSLLSFYIFFEASLIPTLLLILgWGYQPERLQAGIYLIFyTLIASLPLLLVLFKVYDCSHTLYFPLLFDF---- 176
Cdd:PRK08668 112 LGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGlind 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 177 --GSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGL----------- 243
Cdd:PRK08668 190 tsTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvp 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 244 SFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYE 323
Cdd:PRK08668 270 LFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
330
....*....|....*...
gi 1824665963 324 RLGSRSLLINSGMINLMP 341
Cdd:PRK08668 350 RTGTTKISEMGGLIEKMP 367
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-359 |
2.74e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 68.60 E-value: 2.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 91 FMVLFLMIMLYCSFSSLSLLSFyIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYF 170
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFL-FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 171 PLLFDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLSFNYFWL 250
Cdd:PRK08667 195 SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLIL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 251 ALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMG--SLCLM---------IGHGLCSSGLFCLSN 319
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldTLALLalggalfhsLNHALFKSLLFLTAG 354
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1824665963 320 IIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK08667 355 SVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPP 394
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-324 |
7.63e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 66.90 E-value: 7.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 113 YIFFEASLIPTLLLIlGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDFGSFYFLFylfIILAFL 192
Cdd:PRK07234 120 YVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFAL---IALGLL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 193 IKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLSFNYFWLALGLSGgvlvSFICFRQVDLKS 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKR 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1824665963 273 LIAYSSVAHMSMVIGGlmtmnwwGCMGSLcLMIGHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 272 MLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
178-327 |
1.10e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 63.24 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 178 SFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVI--SFLGLSFNYFWLALGLS 255
Cdd:PRK08676 203 SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIF 282
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1824665963 256 GGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGS 327
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRS 354
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-404 |
6.60e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.90 E-value: 6.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 185 LFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVI-----SFLGLSFNYFWLALGLSGGVL 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 260 VSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINL 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824665963 340 MPSMALWWFLLSSSNMAAPPSLNLLGELGLLNSIIswSSLTFLTLIFLSFFSAVYTLYMYSYSQH 404
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFI--KSNAWIGLVVLLVGSGLSVIYVWKIVEA 435
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-359 |
2.06e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 54 VDFFSFGLILLSFWICSLMITAS---SSVYLSSYHSSI---FIFMVLFLMIMLyCSFSSLSLLSFYIFFEASLIPTLLLI 127
Cdd:PRK12646 72 LDLRLDGLSLMFSLIISLIGIAVffyATQYLSSRKDNLprfYFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 128 LGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLF-------DFGSFYFLFYLFIILAFlIKMPMFLV 200
Cdd:PRK12646 151 SYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILgqadhikNHGLFIPMIFMFLLGAF-TKSAQFPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 201 HLWLPSAhVEAPISGSMIL-AGVLLKLGGYGVFRVMSVISfLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSV 279
Cdd:PRK12646 230 HIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 280 AH----MSMV-IGGLMTMNWWGCMGSLCLMI---------GHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMAL 345
Cdd:PRK12646 308 SQlgmiMAMVgIGGGYAQHQQDAIASIYVFVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
330
....*....|....
gi 1824665963 346 wWFLLSSSNMAAPP 359
Cdd:PRK12646 388 -VMTIAALSMAGVP 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-349 |
3.76e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 55.36 E-value: 3.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 86 SSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLiLGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCS 165
Cdd:PRK12665 110 VSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAAT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 166 HTLYFPLL------FDFGSFYFLFYLFIIlAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVIs 239
Cdd:PRK12665 189 GTLNMADLavrldeLPSGTRTALFAVLLV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 240 FLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSN 319
Cdd:PRK12665 267 FPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVG 346
|
250 260 270
....*....|....*....|....*....|
gi 1824665963 320 IIYERLGSRSLLINSGMINLMPSMALWWFL 349
Cdd:PRK12665 347 LIERQAGSSSLRRLGGLAKASPLLAVLFFV 376
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
188-359 |
3.61e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 3.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 188 ILAFL---IKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVmsVISFLGLS---FNYFWLALGLSGGVLVS 261
Cdd:PRK06521 214 LLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGAPgwwWGVLVLALGAISAVLGV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 262 FICFRQVDLKSLIAYSSVAHM---SMVIG--------GLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSL 330
Cdd:PRK06521 292 LYALAEHDLKRLLAYSTIENIgiiFVGLGlamvfiayGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDM 371
|
170 180
....*....|....*....|....*....
gi 1824665963 331 LINSGMINLMPSMAlWWFLLSSSNMAAPP 359
Cdd:PRK06521 372 EKLGGLIRRMPWTA-WAFLIGCLAISALP 399
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-359 |
7.89e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 51.31 E-value: 7.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 187 IILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLSFNYFWL--ALGLSGGVLVSFIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMA 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170
....*....|....*
gi 1824665963 345 LWWFLLSSSNMAAPP 359
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-359 |
2.30e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.81 E-value: 2.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 61 LILLSF-WICSLMITASSSVYLSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLIlGWGYQPERLQA 139
Cdd:PRK06589 89 LLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLSG 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 140 GIYLIFYTLIASLPLLL-VLFKVYDCSHTLYFPLLFDFGSFYFLFYLFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMI 218
Cdd:PRK06589 168 GYKYLKILMISALLLFLpAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 219 LAGVLLKLGGYGVFRV------MSVISFLGLSFNYFWLALGLSgGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTM 292
Cdd:PRK06589 248 HAVIVVKTGLFCIYKIllyifgLSYLQRIFAEFNWLIFIPIVS-IFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIL 326
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824665963 293 NWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK06589 327 TPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-341 |
2.93e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 49.33 E-value: 2.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 113 YIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDFGSFYFLFYLFIILAFL 192
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 193 I-----KMPMFLVHLWLPSAHVEAPISGSMILagVLLKLGG-YGVFRVmsVISFLGLSFNYF---WLALGLsgGVLVSFI 263
Cdd:PRK08376 227 IaglamKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINLAtvgWVIIIL--GCLTMFV 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 264 ----CFRQVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCM---GSLCLMIGHGLCSSGLFCLSNIIYERLGS 327
Cdd:PRK08376 301 gvamAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGT 380
|
250
....*....|....
gi 1824665963 328 RSLLINSGMINLMP 341
Cdd:PRK08376 381 RNLNELGGLARTMP 394
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-359 |
1.94e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.78 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 52 FGVDFFSFGLILLSFWICSLMITASSSVYLSSYHSSIFIFMVLFLMIMLYCSFSSLSLLSFYIFFEASLIPTLLLILGWG 131
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 132 YQPErLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLF---------DFGSFYFLFYLFIILaFLIKMPMFLVHL 202
Cdd:PRK07691 153 TKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISvkiaelsagQTGLITVVAILFLFV-FATKAGLFPLYF 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 203 WLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVISFLGLSFNYfwLALGLSGGVLVSFICF---RQVDLKSLIAYSSV 279
Cdd:PRK07691 231 WLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTH--YLILILALLTIIFGVIgavAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 280 AHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMAlWWFLLSSSNMAAPP 359
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLAGIP 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-359 |
2.08e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.88 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 188 ILAFLI------KMPMFLVHLWLPSAHVEA-PIS-----GSMILAGVLLKLGGYGVFRVMSVisflglsFNYFWLALGLS 255
Cdd:PRK12650 209 VVAVLIavaaftKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 256 GGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSG 335
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGS 361
|
170 180
....*....|....*....|....
gi 1824665963 336 MINLMPsMALWWFLLSSSNMAAPP 359
Cdd:PRK12650 362 LWRRMP-FTFVSVTIAALSMAAVP 384
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-359 |
2.81e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 43.37 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 80 YLSSYHSSIFIFMVLFL-------MIMLYcsfsslsllsfyIFFEASLIPTLLLIlgwGYQPER-------LQAgiylIF 145
Cdd:PRK12647 93 DLGRFYSYILLFMASMLglvlsdnLITLF------------VFWELTSITSFLLI---GFNHEReaarraaLQA----LL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 146 YTLIASLPLLLVLFKVYDCSHTLYFPLLFDFG------SFYFLFYLFIILAFLIKMPMFLVHLWLPSAhVEAPI------ 213
Cdd:PRK12647 154 VTGGGGLALLAGLILLGNVTGTYSLSELLASGdvirehPLYLAILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTpvsayl 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 214 -SGSMILAGVLLklggygvfrVMSVISFLGLSFNYFWLaLGLSGG---VLVSFICFRQVDLKSLIAYSSVahmsMVIGGL 289
Cdd:PRK12647 233 hSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGltmLTGALLAVRQTDLKLILAYSTV----SALGTL 298
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824665963 290 MTMNWWGC----MGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK12647 299 VMLLGLGSelaiKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
134-359 |
1.90e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 40.34 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 134 PERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLFDF-GSFYFLFYLFIILAFLIKMPMFLVHLWLPSAhVEAP 212
Cdd:PRK06525 159 PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLhGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 213 ISGSMIL-AGVLLKLGGYGVFRVMSVISFLGLSFNYFWLALGLSGGVLVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMT 291
Cdd:PRK06525 238 TPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSL 317
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1824665963 292 M---NWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK06525 318 AilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
113-359 |
2.11e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 40.32 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 113 YIFFEASLIPTLLLILgWGYQPERLQAGIYLIFYTLIASLPLLLVLFKVYDCSHTLYFPLLF-------DFGSFYFLFYL 185
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAmrlndmgDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 186 FIiLAFLIKMPMFLVHlWLPSAHVEAPISGSMILAGVLLKLGGYGVFRVMSVI----SFLGLSFNYFWLALGLSGGVLVS 261
Cdd:PRK12663 213 FL-LAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMVIGALGA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 262 FIcfrQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMP 341
Cdd:PRK12663 291 LA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEP 367
|
250
....*....|....*...
gi 1824665963 342 SMALWWFLLSSSNMAAPP 359
Cdd:PRK12663 368 LFGALFLILIFAIGGLPP 385
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-292 |
2.44e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.20 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 113 YIFFEASLIPTLLLILGWGYQPERLQAGIYLIFYT------LIASLPLLLVLFKVYDCSHTLYFPLLFDFGSFYFLFYLF 186
Cdd:PRK12649 137 FIFWELTSITSFMLIGYWRHRPESVYGATKSLLITaggglfMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLIT 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 187 IILAFL---IKMPMFLVHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGVFRVMSVisflgLSFNYFWLAL----GLSGGV 258
Cdd:PRK12649 217 LILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPI-----FSGTEAWFILvsgtGMITMV 290
|
170 180 190
....*....|....*....|....*....|....
gi 1824665963 259 LVSFICFRQVDLKSLIAYSSVAHMSMviggLMTM 292
Cdd:PRK12649 291 LAGFLAFRQTDIKAILAYSTISQLAY----LMTM 320
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-359 |
3.12e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.81 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 200 VHLWLPSAHVEAPISGSMILAGVLLKLGGYGvfrvMSVISFLGLSFNYFWLALGLSGGVLVSFI----CFRQVDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLG----ILTLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 276 YSSVAHMSMVIGGL-----------MTMNWWGCMGSLCLMIGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMA 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*
gi 1824665963 345 LwWFLLSSSNMAAPP 359
Cdd:PRK08042 355 I-AMLVGLMAMAALP 368
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-315 |
3.75e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 39.42 E-value: 3.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665963 185 LFIILAFLIKMPMFLVHLWLPSAHVEAPISGSMILAGVLlKLGGYGVFRVMSVISFLGLSFNYFWLALGLSGGVLV--SF 262
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLvgNL 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1824665963 263 ICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLCLMIGHGLCSSGLF 315
Cdd:PRK05777 287 AALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| |
