|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
8.29e-172 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 488.89 E-value: 8.29e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLLNNCWWLVHSLMFLSSFLFMICVYSYSDLNMISYYFGVDYFSFSLILLSFWVCSLMITASGSVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 81 LSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 161 VYDFSGTLYFPLLMDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISY 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 241 LGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 321 IYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1980524122 401 YSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCLKGEYFF 443
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
8.78e-120 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 356.74 E-value: 8.78e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLLNNCWWLVHS---LMFLSSFLFMICVYSYSDLNMISYYFGVDYFSFSLILLSFWVCSLMITASG 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 78 SVYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 158 LLKVYDFSGTLYFPLL-MDFGSYYF--MFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 235 MKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 315 FCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1980524122 395 TLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCLKGE 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-444 |
2.46e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 351.83 E-value: 2.46e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 47 MISYYFGVDYFSFSLILLSFWVCSLMITASGSVYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 127 ILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMDFGSYYFM---FYVFMILAFLVKMPMFLFHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSmglWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 204 LPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 284 MVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 364 VGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCLKGEYFF 443
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLF 414
|
.
gi 1980524122 444 V 444
Cdd:MTH00150 415 M 415
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
5.13e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 342.18 E-value: 5.13e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLL---NNCWWLVHSLMFLSSFLFMICVY-SYSDLNMISYYFGVDYFSFSLILLSFWVCSLMITAS 76
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskpKFLWTNTTTYSLLIALLSLQWLKpPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 77 GSVYLSSYYSN--FFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPL 154
Cdd:MTH00124 81 QNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 155 LLVLLKVYDFSGTLYFPLLMDFGSY------YFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGG 228
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 229 YGIFRVMKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHG 308
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 309 LCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLS 388
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1980524122 389 FFSAVYTLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCLKGE 440
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPE 452
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.19e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 341.19 E-value: 1.19e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLLNNCWWLVHSLMFLSSFLFMICVYS-YSDLNMISYYFGVDYFSFSLILLSFWVCSLMITASGSV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNsFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 80 YLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLL 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 160 KVYDFSGTLYFPLLMDFGSYYFMFYVFMI---LAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWIflmLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 237 VISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 317 LSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1980524122 397 YMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCLKGEYFFV 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
6.73e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 324.18 E-value: 6.73e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLLNNCWWL-----VHSL--MFLSSFLFMicvYSYSDLNMISYYFGVDYFSFSLILLSFWVCSLMI 73
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLwtlttTNSLiiAFLSLMWFN---LPSETMNFTNKYFGIDQISSPLLILTCWLLPLMI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 74 TASGSvYLSS---YYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVA 150
Cdd:MTH00068 78 LASQN-HLKNepiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 151 SLPLLLVLLKVYDFSGTLYFPLLMDFGSYYFM------FYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLL 224
Cdd:MTH00068 157 SLPLLIALLILQNSLGSLSLILLELMSPMQLMtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 225 KLGGYGIFRVMKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLM 304
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 305 VGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVL 384
Cdd:MTH00068 317 ISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILIT 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524122 385 IFLSFFSAVYTLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCLKGEYFF 443
Cdd:MTH00068 397 GLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELIS 455
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-432 |
6.51e-105 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 318.84 E-value: 6.51e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLLNNCWWLVHSLMFLSSFLFMICVY-----SYSDLNMISYYFGVDYFSFSLILLSFWVCSLMITA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFllnnhWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 76 SGSV--YLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00044 81 SINHlsNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 154 LLLVLLKVYDFSGTLYFPL------LMDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLselnwlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 228 GYGIFRVMKVISYLGVSF-NYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVG 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 307 HGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1980524122 387 LSFFSAVYTLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPL 432
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPL 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.76e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 310.29 E-value: 1.76e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLL--NNCWWL---VHSLMF-LSSFLFMicvYSYSDLNM-ISYYFGVDYFSFSLILLSFWVCSLMI 73
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLskNNMIWInttTYSLLIsLISLLLL---NQPNDNSLnFSLLFFSDSLSTPLLILTTWLLPLML 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 74 TASGSVYL--SSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVAS 151
Cdd:MTH00110 78 MASQHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 152 LPLLLVLLKVYDFSGTLYFPL-------LMDFGSYYFMFYVFMiLAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLL 224
Cdd:MTH00110 158 LPLLVALLYIQNNLGSLNFLLlqlwaqpLPNSWSNNLLWLACM-MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 225 KLGGYGIFRVMKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLM 304
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 305 VGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVL 384
Cdd:MTH00110 317 IAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILM 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1980524122 385 IFLSFFSAVYTLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCL 437
Cdd:MTH00110 397 GLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-432 |
2.53e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 296.85 E-value: 2.53e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 3 KYLFMTVFLIPLCLLNNC---WWLVHSLMFLSSFLFMICVYSYSDLNMIS--YYFGVDYFSFSLILLSFWVCSLMITASG 77
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKkwlWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 78 S--VYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLL 155
Cdd:MTH00206 81 NhmKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 156 LVLLKVYDFSGTLYFPLLMD---FGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIF 232
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFsklTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 233 RVMKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSS 312
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 313 GLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSA 392
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1980524122 393 VYTLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPL 432
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPV 440
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
1.29e-87 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 274.53 E-value: 1.29e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLLNNCWWL-----VHSLMFLSSFLFMICVYSYSDLNMISYYFGVDYFSFSLILLSFWVCSLMITA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 76 SGSVYLSSYYSNFFVFMVLL--LMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLtsLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 154 LLLVLLKVYDFSGTL------YFPLLMDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 228 GYGIFRVMKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 308 GLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1980524122 388 SFFSAVYTLYMYSYSQHGSYYSGVYTCSLGYLREYHLLFLHWIPLNILCLKGE 440
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPE 453
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
3.13e-59 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 201.08 E-value: 3.13e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGSVylSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNE--IKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 128 LGWGYqPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLL------MDFGSYYFMFYVFMIlAFLVKMPMFLFH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAelaaapLPLTAQLLLFLAFFI-AFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGVS-FNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVA 280
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAyFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 281 HMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPS 360
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350
....*....|....*....|....*....|....*....
gi 1980524122 361 LNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLYMY 399
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
8.98e-54 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 186.95 E-value: 8.98e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGSVylSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEE--IKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 128 LGWGYqPERLQAGIYLIFYTLV----ASLPLLLVLLKVYDFSGTLYFPLLM----DFGSYYFMFYVFMIlAFLVKMPMFL 199
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLgsllMLVAIIYLVVVYYNATGTFDIADLLnlplPPGVQYWLFLAFFI-AFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 200 FHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLG-VSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSS 278
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDAsHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 279 VAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAP 358
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1980524122 359 PSLNLVGE-LSLLNSIMSWSTFSFLVLIFLsFFSAVYTLYMY 399
Cdd:PRK05846 390 GTSGFVGEfLILLGSFQVNPVIAFIATTGL-ILAAVYSLWLY 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
1.81e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 180.59 E-value: 1.81e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 106 SLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLL------MDFGSY 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 180 YFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGVSFNYFWLGLGLSGGVV 259
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 260 VSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLS-NIIYERLGSRSLLINSGMIN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1980524122 339 LMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
1.24e-51 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 180.91 E-value: 1.24e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGsvYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 128 LGWGyQPERLQAGIYLIFYTLVASLPLLLVLLKVY-----DFSGTLYFPLLMDFGSYYFMFYVFMIlAFLVKMPMFLFHL 202
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYflgggTFDLLELLNLPLPFGVQTWLFLAFFI-AFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAH 281
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 282 MSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSL 361
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 1980524122 362 NLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLYMY 399
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-399 |
4.01e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 179.49 E-value: 4.01e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 51 YFGVDYFSFSLILLSFWVCSLMITASGSVYlsSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGW 130
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSI--KFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 131 GYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTL-YFPLLMDFGSYYFMFYVFM--ILAFLVKMPMFLFHLWLPKA 207
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 208 HVEAPISGSMILAGVLLKLGGYGIFRVMKVIsYLGVSFNYFWLGLGLSGGVVV--SFICFRQVDLKSLIAYSSVAHMSMV 285
Cdd:MTH00204 236 HVEAPVAGSVILAGILLKLGGYGFLRFSWPL-FPAASEYFAPLIVMLSVIAVIygSLTTCRQVDFKRLIAYSSVAHMGLV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 286 IGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVG 365
Cdd:MTH00204 315 PLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVG 394
|
330 340 350
....*....|....*....|....*....|....
gi 1980524122 366 ELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLYMY 399
Cdd:MTH00204 395 EFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
3.38e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 174.47 E-value: 3.38e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 89 FVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTL 168
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 169 YFPLL----MDFGSYYFMFYVFMiLAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKVISYLGV 243
Cdd:MTH00217 191 DYQALcclkIEKELQYFIFLGFF-LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 244 SFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00217 270 YFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524122 324 RLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSllnSIMSWSTFSFLVLIFLSF---FSAVYTLYMY 399
Cdd:MTH00217 350 RHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFL---SLLAAFEYSYIVGVLASLgmvLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
2.21e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 170.10 E-value: 2.21e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 52 FGVDYFSFSLILLSFWV--CSLMITASGSVYLSSYysnfFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 130 WGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMDF-----GSYYFMFYVFMILAFLVKMPMFLFHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 205 PKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGV-SFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAqNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 284 MVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 1980524122 364 VGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
26-418 |
9.59e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 146.98 E-value: 9.59e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 26 SLMFLSSFLFMICVYSYSDLNMISYYFGVDYFSFSLILLSFWVCSLMITASGSVYLSSYYSNffvfmvlLLMIMLYCSFA 105
Cdd:MTH00094 8 SPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSN-------LLILICLLFFV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 106 SLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMDFgsyyfMFYV 185
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSW-----EMFF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 186 FMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLgvsFNYFWLGLGLSGGVVVSFICF 265
Cdd:MTH00094 156 ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 266 RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMAL 345
Cdd:MTH00094 233 FQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGL 312
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1980524122 346 WWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYSGVYTCSLGY 418
Cdd:MTH00094 313 IFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
3.90e-35 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 136.31 E-value: 3.90e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 53 GVDYFSFSLILLSFWVCSLMITASGSVylsSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGY 132
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 133 QpERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPL----LMDF-GSYYFMFYVFMILAFLVKMPMFLFHLWLPKA 207
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHTWLPDA 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 208 HVEAPISGSMILAGVLLKLGGYGIFRV-MKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK12561 212 HGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 287 GGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMP-SMALwwFLLSS-SNMAAPPSLNLV 364
Cdd:PRK12561 292 LGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPkTFAL--FTASSmASLALPGMSGFV 369
|
330 340
....*....|....*....|....*....
gi 1980524122 365 GELSLLNSIMSWSTFSFLVLIFLSFFSAV 393
Cdd:PRK12561 370 SELTVFLGITSSDVYSSTFRTITILLAAV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-403 |
1.15e-31 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 125.26 E-value: 1.15e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 52 FGVDYFSFSLILLSFWVCSLMITASGSVYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 132 YqPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMDFGSYY-----FMFYVFMILAFLVKMPMFLFHLWLPK 206
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKVIsyLGVSFNYFW----LGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHM 282
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLL--FGADPALFLgtllLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 283 SMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLN 362
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1980524122 363 LVGELSLLNSIMSWSTFSFLVLIFL-SFFSAVYTLYMYSYSQ 403
Cdd:COG0651 389 FVSKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
3.64e-28 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 116.73 E-value: 3.64e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 53 GVDYFSFSLILLSFWVCSLMITASGSVylsSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 133 QpERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPL----LMDFG-SYYFMFYVFMILAFLVKMPMFLFHLWLPKA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 208 HVEAPISGSMILAGVLLKLGGYGIFRV-MKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 287 GGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGE 366
Cdd:PRK02546 320 IGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAE 399
|
330 340
....*....|....*....|....*..
gi 1980524122 367 LSLLNSIMSWSTFSFLVLIFLSFFSAV 393
Cdd:PRK02546 400 LMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-393 |
4.27e-27 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 113.12 E-value: 4.27e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 52 FGVDYFSFSLILLSFWVCSLMITASGSVYLSSyysNFFVFmvllLMIMLYC----SFASLSLLSFYIFFEASLVPTLLLI 127
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRNS---RLFYF----LMLAMYSgqigLFSSRDLLLFFIMWELELIPVYLLL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 128 LGWGYQpERLQAGIYLIFYTLV--ASLPLLLVLLKVYDFSG-TLYFPLLMDfGSYYF----MFYVFMILAFLVKMPMFLF 200
Cdd:CHL00011 153 SMWGGK-KRLYSATKFILYTAGgsIFLLIGVLGMGLYGSNEpTLNFETLAN-QSYPValeiLFYIGFLIAYAVKLPIIPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 201 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKVISYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSV 279
Cdd:CHL00011 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSV 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 280 AHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:CHL00011 311 SHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPG 390
|
330 340 350
....*....|....*....|....*....|....
gi 1980524122 360 SLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAV 393
Cdd:CHL00011 391 MSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
1.85e-25 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 108.63 E-value: 1.85e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGSvylSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 128 LGWGYQpERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYF---PLLMDF--GSYYFMFYVFMILAFLVKMPMFLFHL 202
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHTlpLSTQLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRvmkvisyLGVSF---NYFWLGLGLSGGVVVSFI-----CFRQVDLKSLI 274
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLR-------FGVGLfpeAWVYLAPWLATWAVVSVLygascAIAQKDMKKMV 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1980524122 275 AYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMIN 338
Cdd:PRK06473 300 AYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-401 |
1.38e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 96.87 E-value: 1.38e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 52 FGVDYFSFSLILLSFWVCSLMITASgsVYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 132 YQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMD---FGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAH 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalaENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 209 VEAPISGSMILAGVLLKLGGYGIFRVMKVI--SYLGVSFNYFWLGLGLS--GGVVVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVfgGDFRFALGLGWLLAVLAllSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 285 VIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLV 364
Cdd:PRK08375 310 ILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFV 389
|
330 340 350
....*....|....*....|....*....|....*...
gi 1980524122 365 GELSLLNSIMSWSTFSFLVLIFL-SFFSAVYTLYMYSY 401
Cdd:PRK08375 390 SKWYLVVGAVEAGQWLVLAVLLAsSLLALLYFLRIWYR 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-394 |
7.08e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 94.78 E-value: 7.08e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 48 ISYYFGVDYFSFSLILLSfwvCSLMITASGSVYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 128 LGWGYQpERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFpllmDFGSYY---------FMFYVFMILAFLVKMPMF 198
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF----DYDAIStqnlslntqLILLTGLLLGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 199 LFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkvISYLGVSFNYFWLGLGLSGGVVV---SFICFRQVDLKSLIA 275
Cdd:PRK07363 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 276 YSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNM 355
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGM 380
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1980524122 356 AAPPSLNLVG---ELSLLNSIMSWSTFSFLVLIFLSFFSAVY 394
Cdd:PRK07363 381 ASAGIPGLVGfvaEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
20-419 |
1.86e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 86.90 E-value: 1.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 20 CWWLVHSLMFLSSFLFMICV--YSYSDLNMISYYFGVDYFSFSLILLSfwvcsLMITASGSVYLSSYYSNFFVFMVLLLM 97
Cdd:MTH00062 7 GFFLGFLLLLLFCLLYSSGVgcCILVVNNVFNGLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 98 IMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMDFG 177
Cdd:MTH00062 82 IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 178 SYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISylgVSFNYFWLGLGLSGG 257
Cdd:MTH00062 162 SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIF---SGSFLGYLFLCCLFS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 258 VVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMI 337
Cdd:MTH00062 239 VFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 338 NLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYSGVYTCSLG 417
Cdd:MTH00062 319 NGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLVPLILLGHLLIRSESYESINVSNYS 398
|
..
gi 1980524122 418 YL 419
Cdd:MTH00062 399 YL 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
165-398 |
5.32e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 83.10 E-value: 5.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 165 SGTLYFPLLMDFGSYYF----MFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISY 240
Cdd:PRK12667 203 IRGLSFPLTGGLAGNPPlalgVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 241 LGVSFNYFW-------LGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSG 313
Cdd:PRK12667 283 ISPSLIDFRaalspilIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSL 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 314 LFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLsfFSAV 393
Cdd:PRK12667 363 LFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLI--ASAI 440
|
....*
gi 1980524122 394 YTLYM 398
Cdd:PRK12667 441 SLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
184-394 |
6.46e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 82.67 E-value: 6.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 184 YVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVIS-YLGVSF-NYFWLGLGLSGGVVVS 261
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 262 FICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMP 341
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1980524122 342 SMAlWWFLLSSSNMA-APPSLNLVGELSLLNSIMS----WSTFSFLVLIFLSFFSAVY 394
Cdd:PRK06458 377 LTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLArgplLIAILLLLLLTLAFAALVR 433
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
41-341 |
3.83e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 77.73 E-value: 3.83e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 41 SYSDLNMISYYFGVDYFSFSLILLSFWVCSLMitASGSVYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASL 120
Cdd:PRK08668 54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSV--AFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 121 VPTLLLILgWGYQPERLQAGIYLIFyTLVASLPLLLVLLKVYDFSGTLYFP-----LLMDFGSYYFMFYVFMILAF-LVK 194
Cdd:PRK08668 132 FSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFAdisqgLINDTSTGFALIVFLFLLAFgVAK 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 195 MPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGV-----------SFNYFWLGLGLSGGVVVSFI 263
Cdd:PRK08668 210 AGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLFNYILAWLGNISIIVGTLM 289
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1980524122 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMP 341
Cdd:PRK08668 290 AILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMP 367
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
80-387 |
2.89e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.77 E-value: 2.89e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 80 YLSSYYSNFFVFMVLLLMimlycsfASLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLL 159
Cdd:PRK08667 111 NLLSALTALFILSMLGVV-------ASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGII 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 160 KVYDFSGTLYFPLLMDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVIS 239
Cdd:PRK08667 184 VLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 240 YLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLM-----------VGHG 308
Cdd:PRK08667 264 SPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHA 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 309 LCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNS-IMSWSTFSFLVLIFL 387
Cdd:PRK08667 344 LFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESfFQSFSVADPLIKILL 423
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
80-398 |
3.54e-13 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 71.71 E-value: 3.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 80 YLSSYYSN---FFVFMVLLLMIMLYCSFASLSLLsFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLL 156
Cdd:PRK12646 101 YLSSRKDNlprFYFYLTLFMFSMIGIVLSDNTIL-MYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 157 VLLKVYDFSGTLYFPLLMD-----FGSYYFMFYVFMIL--AFlVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGG 228
Cdd:PRK12646 180 GFIMLYIMTGTNNITEILGqadhiKNHGLFIPMIFMFLlgAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 229 YGIFRVMKVISyLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAH----MSMV-IGGLMTMNWWGCMGSLSL 303
Cdd:PRK12646 258 FLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYV 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 304 MV---------GHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALwWFLLSSSNMAAPPSLN--LVGELSL--L 370
Cdd:PRK12646 337 FVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgfLSKEMFLdaL 415
|
330 340 350
....*....|....*....|....*....|....*
gi 1980524122 371 NSIMSWSTFSFLVLIFL-------SFFSAVYTLYM 398
Cdd:PRK12646 416 TQTGQLSQFSLISMIIIvfigviaSIFTFTYALYM 450
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
89-399 |
6.29e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.55 E-value: 6.29e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 89 FVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILGWGYQpERLQAGIYLIFYTLVASLPLLLVLLKVYDFS--- 165
Cdd:PRK08676 104 FYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqa 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 166 ---GTLYFPLLMDFGSYY-----FMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKV 237
Cdd:PRK08676 183 lgtGTLNWTELAAHASLLspsvlGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSAL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 238 I--SYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLF 315
Cdd:PRK08676 263 LrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 316 CLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTFSFLVLIFLSFFSAVYT 395
Cdd:PRK08676 343 FSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSF 422
|
....
gi 1980524122 396 LYMY 399
Cdd:PRK08676 423 AIFL 426
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-103 |
1.43e-12 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 63.70 E-value: 1.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 1 MLKYLFMTVFLIPLCLLNNCWWL-----VHSLMFLSSFLFMICVYSYSDLNMISYYFGVDYFSFSLILLSFWVCSLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1980524122 76 SGSVYLSS--YYSNFFVFMVLLLMIMLYCS 103
Cdd:pfam01059 81 SQKHLKSEpnNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-324 |
5.74e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 67.28 E-value: 5.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 86 SNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLIlGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFS 165
Cdd:PRK07234 93 TRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQAN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 166 GTLYFPLLMDFGSYYFmfyVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGVSF 245
Cdd:PRK07234 172 GTFAFSGLATADPEAF---ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIV 248
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524122 246 NYFWLGLGLSGgvvvSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTmnwwgcMGSLSLMvgHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 249 RIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV------GGLYALA--HGLVKSTLFLCAGALPSR 315
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-395 |
2.62e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.14 E-value: 2.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 186 FMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVI-----SYLGVSFNYFWLGLGLSGGVVV 260
Cdd:PRK12662 214 FIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 261 SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLM 340
Cdd:PRK12662 294 SVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524122 341 PSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIMSWSTF-SFLVLIFLSFFSAVYT 395
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWiGLVVLLVGSGLSVIYV 429
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
187-362 |
2.25e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 59.52 E-value: 2.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 187 MILAFL---VKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkVISYLGVS---FNYFWLGLGLSG---G 257
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGAPgwwWGVLVLALGAISavlG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 258 VVVSFIcfrQVDLKSLIAYSSVAHMSMVIGGL-MTM----NWWGCMGSLSLMVG------HGLCSSGLFCLSNIIYERLG 326
Cdd:PRK06521 291 VLYALA---EHDLKRLLAYSTIENIGIIFVGLgLAMvfiaYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATG 367
|
170 180 190
....*....|....*....|....*....|....*.
gi 1980524122 327 SRSLLINSGMINLMPSMAlWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 368 TRDMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-365 |
8.60e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 57.29 E-value: 8.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 78 SVYLSSYysnffvfmvLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLiLGWGYQPERLQAGIYLIFYTLVASLPLLLV 157
Cdd:PRK12665 111 SIFLPTY---------LILVAGVSNAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIG 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 158 LLKVYDFSGTLYFPLL------MDFGSYYFMFYVFMIlAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGI 231
Cdd:PRK12665 181 IALVYAATGTLNMADLavrldeLPSGTRTALFAVLLV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAI 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 232 FRVMKVIsYLGVSFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCS 311
Cdd:PRK12665 260 IRTHTLL-FPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQ 338
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1980524122 312 SGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLlsssnmaapPSLNLVG 365
Cdd:PRK12665 339 TTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFV---------PALNLGG 383
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-396 |
1.38e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 53.67 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 59 FSLILLSFWVCSLMIT-ASGSVYLSSYYSNFFVFMVLLLMIMLYCSFASlSLLSFYIFFEASLVPTLLLIlGWGYQPERL 137
Cdd:PRK06589 88 FLLLIGFLWICALLYTpKYLAINNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCYELLTISTAFLI-GHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 138 QAGI-YLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGS 216
Cdd:PRK06589 166 SGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 217 MILAGVLLKLGGYGIFRVMKVISYLGVSFNYFWLGLGLSGGVVV-----SFICFRQVDLKSLIAYSSVAHMSMVIGGLMT 291
Cdd:PRK06589 246 LLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAFI 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 292 MNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLL- 370
Cdd:PRK06589 326 LTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILl 405
|
330 340 350
....*....|....*....|....*....|
gi 1980524122 371 ----NSIMSWSTFSFLVLIFLSFFSAVYTL 396
Cdd:PRK06589 406 aaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
81-398 |
1.51e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.56 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 81 LSSYYSNFFVFMVLLLMIMLycsfaSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLK 160
Cdd:PRK08376 120 LDKYYTLILLLELGMLGMAI-----TGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIAL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 161 VYDFSGTL---YFPLLMDFGSYYF--MFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILagVLLKLGG-YGIFRV 234
Cdd:PRK08376 195 LYGQYGTLnmaYLAVKMSENPTVVakIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 235 mkVISYLGVSFNYFWLG-----LGLSGGVVVSFICFRQVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCM-- 298
Cdd:PRK08376 273 --LFSIYGPAINLATVGwviiiLGCLTMFVGVAMAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIal 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 299 -GSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPsMALWWFLLSSSNMAAPPSLN------LVGELS-LL 370
Cdd:PRK08376 351 aGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLF 429
|
330 340
....*....|....*....|....*...
gi 1980524122 371 NSIMSWSTFSFLVLIFLSFFSAVYTLYM 398
Cdd:PRK08376 430 NPILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-359 |
4.47e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 52.08 E-value: 4.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 187 MILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGVSFNYFWL--GLGLSGGVVVSFIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMA 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170
....*....|....*
gi 1980524122 345 LWWFLLSSSNMAAPP 359
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-388 |
7.43e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.46 E-value: 7.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 52 FGVDyFSFSLILLSFwVCSLMITASGS---VYLSSY------YSNFFVFMVLLLMIMLYCSFASlSLLSFYIFFEASLVP 122
Cdd:PRK12647 54 LGVN-LSFLLDGLSL-TFALLITGIGTlivLYAGGYlkghpdLGRFYSYILLFMASMLGLVLSD-NLITLFVFWELTSIT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 123 TLLLIlgwGYQPER-------LQAgiylIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMDFG------SYYFMFYVFMIL 189
Cdd:PRK12647 131 SFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSLSELLASGdvirehPLYLAILLLVLG 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 190 AFLVKMPMFLFHLWLPKAhVEAPI-------SGSMILAGVLLklggygifrVMKVISYLGVSFNYFWLgLGLSGG---VV 259
Cdd:PRK12647 204 GAFTKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGltmLT 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 260 VSFICFRQVDLKSLIAYSSVahmsMVIGGLMTMNWWGCMGSLS----LMVGHGLCSSGLFCLSNIIYERLGSRSLLINSG 335
Cdd:PRK12647 273 GALLAVRQTDLKLILAYSTV----SALGTLVMLLGLGSELAIKaavlFLVAHSLYKGALFMVAGIIDHETGTRDITKLGG 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524122 336 MINLMPSMALWWFLLSSSNMAAPPSLNLVGELSLLNSIM---SWSTFsFLVLIFLS 388
Cdd:PRK12647 349 LRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLeapLWSLI-LTVAAVLG 403
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-396 |
8.88e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.10 E-value: 8.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 52 FGVDYFSFSLILLSFWVCSLMITASGSVYLSSYYSNFFVFMVLLLMIMLYCSFASLSLLSFYIFFEASLVPTLLLILgWG 131
Cdd:PRK12663 73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 132 YQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLL------MDFGSYYFMFYVFMILAFLVKMPMFLFHlWLP 205
Cdd:PRK12663 152 QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALLFLLAFGMKAALFPFM-WLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 206 KAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISYLGVSFNYFWLGLGLSGGVVV-SFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:PRK12663 231 AAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIgALGALAYKDIRRIAGYQVISSIGF 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 285 VIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPPSLNLV 364
Cdd:PRK12663 311 ILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFW 390
|
330 340 350
....*....|....*....|....*....|..
gi 1980524122 365 GELSLLNSIMSWSTFSFLVLIFLSFFSAVYTL 396
Cdd:PRK12663 391 GKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
185-374 |
2.31e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.04 E-value: 2.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 185 VFMILAFLVKMPMFLFHLWLPKAHVEA-PISGSMILAGVLlKLGGYGIFRVMKVISYLGVsFNYFWLGLGLSGGVVVSFI 263
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAItPVSAFLHAAAVV-KAGIYLLLRFSPVFHDVAV-WNWLLIIVGMITALMGAVF 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 264 CFRQVDLKSLIAYSSVAHMsmviGGLMTMNWWGCMGSLSLMV----GHGLCSSGLFCLSNIIYERLGSRSLLINSGMINL 339
Cdd:PRK12650 290 AVQKTDLKKLTAYSTVSQL----GWIVATIGVGTPFALTAAVvhtlAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRR 365
|
170 180 190
....*....|....*....|....*....|....*.
gi 1980524122 340 MPsMALWWFLLSSSNMAA-PPSLNLVGELSLLNSIM 374
Cdd:PRK12650 366 MP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFL 400
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
185-397 |
6.46e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 45.30 E-value: 6.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 185 VFMILA-FLVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKvisylGVSFNYFW----LGLGLSGGV 258
Cdd:PRK12644 206 VVLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAP-----GFADVPVWrptvLVLGLATML 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 259 VVSFICFRQVDLKSLIAYSSVAHMS--MVIGGLMTMNwwGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGM 336
Cdd:PRK12644 280 LGGWRALRQHDLKLILAYGTVSQLGflTVLVGIGTRD--AALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGL 357
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1980524122 337 INLMPSMAlWWFLLSSSNMAA-PPSLNLVGELSLLNSIM------SWSTFSFLVLIFLSFFSAVYTLY 397
Cdd:PRK12644 358 GRRQPVLA-VVAALAAASMAGlPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
201-362 |
1.06e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.43 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 201 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrvmkVISYLGVSFNYFWLGLGLSGGVVVSFI----CFRQVDLKSLIAY 276
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 277 SSVAHMSMVIGGL-----------MTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINSGMINLMPSMAL 345
Cdd:PRK08042 276 HTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI 355
|
170
....*....|....*..
gi 1980524122 346 wWFLLSSSNMAAPPSLN 362
Cdd:PRK08042 356 -AMLVGLMAMAALPPLN 371
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
87-359 |
2.46e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.42 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 87 NFFVFMVLLLMIMLYCSFASlSLLSFYIFFEASLVPTLLLIlGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSG 166
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVYSS-TLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 167 TLYFPLL--MDFGSYYFMFYVFMILAFlVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKVISYLGV 243
Cdd:PRK06525 192 TFALSALsgLHGSLKYLVFLGILFAAW-GKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPH 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 244 SFNYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTM---NWWGCMGSLSLMVGHGLCSSGLFCLSNI 320
Cdd:PRK06525 270 VIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGA 349
|
250 260 270
....*....|....*....|....*....|....*....
gi 1980524122 321 IYERLGSRSLLINSGMINLMPSMALWWFLLSSSNMAAPP 359
Cdd:PRK06525 350 LSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-292 |
3.81e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.89 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 81 LSSYYSNFFVFMVLLLMIMLycsfaSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYT------LVASLPL 154
Cdd:PRK12649 110 LPRYYQYLLLFMGSMIGMVF-----SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITaggglfMFAGFLL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 155 LLVLLKVYDFSGTLYFPLLMDFGSYYFMFYVFMILAFL---VKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYG 230
Cdd:PRK12649 185 LHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYL 263
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1980524122 231 IFRVMKVISYLGVSFnYFWLGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMviggLMTM 292
Cdd:PRK12649 264 VARIHPIFSGTEAWF-ILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAY----LMTM 320
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
22-290 |
1.09e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 41.09 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 22 WLVHSLMFLSSFLFMICVYSYSDLNmisyYFGVDYFSFSLILLSFWVCSLMITAS----GSVYLSSYYSNFFVFMVLLLM 97
Cdd:TIGR01770 35 KNLSYIVLLSALVSLFLTLQYAAYL----FTGFSFFIVDNFALLIKLILLLSTLLtfffALSYLSKEKINKFEFYILLLF 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 98 IMLYCSFA--SLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLLKVYDFSGTLYFPLLMD 175
Cdd:TIGR01770 111 ALLGIFLLvsSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLL 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 176 F-------GSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVlLKLGGYGIFrvMKVISYLGVSFNYF 248
Cdd:TIGR01770 191 FlsngmlnISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIV-PKIAIFAVF--LRLFLYILFGFSEA 267
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1980524122 249 W----LGLGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVIGGLM 290
Cdd:TIGR01770 268 WqiflAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLL 313
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-315 |
1.38e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 40.96 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 185 VFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIF-RVMKVI--SYLGVSFNYFWLGLGLSGgVVVS 261
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVAfgGLSEDWQQVLAIIAIASM-LVGN 285
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1980524122 262 FICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLF 315
Cdd:PRK05777 286 LAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
184-396 |
4.21e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 39.24 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 184 YVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAgVLLKLGgygifrVMKVISYLGVSFNYFWLGLGLSGgVVVSFI 263
Cdd:MTH00196 98 YLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG------IFSILVSIGLNVNILLIGGLFSL-FVGAIG 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSsglFCLSNIIYERLGSRSLLIN-SGMINLMPS 342
Cdd:MTH00196 170 ALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILALNVYKNLIIEfSGLSRRLPI 246
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1980524122 343 MALWWFLLSSSNMAAPPSLNLVGE-LSLLNSIMSWSTFSFLVLIFLSFFSAVYTL 396
Cdd:MTH00196 247 LAITLALTFLSIAGIPPLVGFLGKwLILLSGVVYQYYLIFLLAVFCSVIAGVYYV 301
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
162-315 |
4.91e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 38.94 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 162 YDFSGTLYFPLLMDF----GSYYFMFY---VFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIFrv 234
Cdd:COG1007 177 YGATGSLNLAGIAAAlaagGANSPLLLlglVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAL-- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 235 MKVISYLGVSFNYFWLGLgLSGGVVVS-----FICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGL 309
Cdd:COG1007 254 LRLLVEAFPGLAADWQLL-LAVLAVLSmtvgnLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLF 332
|
....*.
gi 1980524122 310 CSSGLF 315
Cdd:COG1007 333 MNLGAF 338
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
177-286 |
6.33e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.14 E-value: 6.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524122 177 GSYYFMFYVFMIL--AFlVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKVisyLGVSFNYFWL--G 251
Cdd:PRK12645 205 NSPLFIPAMILILlgAF-TKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFTPI---FAGSQVWFWTvtL 279
|
90 100 110
....*....|....*....|....*....|....*
gi 1980524122 252 LGLSGGVVVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK12645 280 VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIM 314
|
|
| |
