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Conserved domains on  [gi|2127873169|ref|YP_010204190|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Ahnfeltia fastigiata]

Protein Classification

similar to NADH dehydrogenase I subunit H( domain architecture ID 10002943)

protein similar to NADH dehydrogenase I subunit H

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-323 4.31e-155

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440629  Cd Length: 329  Bit Score: 437.25  E-value: 4.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQA-IWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:COG1005   168 AGSLNLSEIVEAQAGgLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 242 SLTTILFLGGWLPPFNLAILYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILLG 321
Cdd:COG1005   248 ALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLL 327


                  ..
gi 2127873169 322 FN 323
Cdd:COG1005   328 FG 329
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-323 4.31e-155

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 437.25  E-value: 4.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQA-IWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:COG1005   168 AGSLNLSEIVEAQAGgLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 242 SLTTILFLGGWLPPFNLAILYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILLG 321
Cdd:COG1005   248 ALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLL 327


                  ..
gi 2127873169 322 FN 323
Cdd:COG1005   328 FG 329
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
2-318 8.74e-147

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 416.13  E-value: 8.74e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   2 ILITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIV 81
Cdd:PRK06076    8 LLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVI 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  82 TFLLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLL 161
Cdd:PRK06076   88 AFIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 162 CSGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:PRK06076  168 LAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVS 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2127873169 242 SLTTILFLGGWLPPFNLAilYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGI 318
Cdd:PRK06076  248 ALITTLFLGGWLPPFPLG--GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
NADHdh pfam00146
NADH dehydrogenase;
9-316 2.16e-143

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 406.47  E-value: 2.16e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   9 KILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLALV 88
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  89 SWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCSGSLNF 168
Cdd:pfam00146  81 AFAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 169 TEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSLTTILF 248
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2127873169 249 LGGWLPPFNLailywvPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVA 316
Cdd:pfam00146 241 LGGWLGPFPL------PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
11-316 6.85e-73

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 228.43  E-value: 6.85e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  11 LTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLALVSW 90
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  91 CVLPLGE--------GMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:NF040610   97 VAIPFGAviingveyPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQAIWYGVpLFPI-LIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFAF-LQPIgFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 242 SLTTILFLGGWLPPF---NLAILYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLS---LGWVFLV 315
Cdd:NF040610  256 FLVVLLFLGGWNLPGfvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSllnLGWAIAL 335


                  .
gi 2127873169 316 A 316
Cdd:NF040610  336 G 336
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-323 4.31e-155

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 437.25  E-value: 4.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQA-IWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:COG1005   168 AGSLNLSEIVEAQAGgLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 242 SLTTILFLGGWLPPFNLAILYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILLG 321
Cdd:COG1005   248 ALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLL 327


                  ..
gi 2127873169 322 FN 323
Cdd:COG1005   328 FG 329
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
2-318 8.74e-147

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 416.13  E-value: 8.74e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   2 ILITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIV 81
Cdd:PRK06076    8 LLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVI 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  82 TFLLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLL 161
Cdd:PRK06076   88 AFIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 162 CSGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:PRK06076  168 LAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVS 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2127873169 242 SLTTILFLGGWLPPFNLAilYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGI 318
Cdd:PRK06076  248 ALITTLFLGGWLPPFPLG--GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-326 2.04e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 407.58  E-value: 2.04e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   7 LLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLA 86
Cdd:MTH00054    5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  87 LVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCSGSL 166
Cdd:MTH00054   85 FIAWGVIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 167 NFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSLTTI 246
Cdd:MTH00054  165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 247 LFLGGWLPPFNLAIlyWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILLGFNWLP 326
Cdd:MTH00054  245 LFLGGWLVISGPTS--YFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALP 322
NADHdh pfam00146
NADH dehydrogenase;
9-316 2.16e-143

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 406.47  E-value: 2.16e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   9 KILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLALV 88
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  89 SWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCSGSLNF 168
Cdd:pfam00146  81 AFAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 169 TEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSLTTILF 248
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2127873169 249 LGGWLPPFNLailywvPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVA 316
Cdd:pfam00146 241 LGGWLGPFPL------PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-326 1.31e-142

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 405.66  E-value: 1.31e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:MTH00216    5 IIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:MTH00216   85 FTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLC 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQ-QAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:MTH00216  165 VGSLSITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMS 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 242 SLTTILFLGGWLPPfnlaILYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILLG 321
Cdd:MTH00216  245 CLTTILFLGGWLSP----IKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                  ....*
gi 2127873169 322 FNWLP 326
Cdd:MTH00216  321 FNGPP 325
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 4-326 8.72e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 350.86  E-value: 8.72e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   4 ITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTF 83
Cdd:MTH00029    7 ITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISF 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  84 LLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCS 163
Cdd:MTH00029   87 TLAILAWAIVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCV 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 164 GSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSL 243
Cdd:MTH00029  167 GSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCM 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 244 TTILFLGGWLPPFN--LAILYW---------VPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWV 312
Cdd:MTH00029  247 MTIFFLGGWLSPLDgiPTPPEAfsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLV 326

                         330
                  ....*....|....
gi 2127873169 313 FLVAGILLGFNWLP 326
Cdd:MTH00029  327 ILTAGILIGFNGVP 340
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-326 7.34e-120

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 347.73  E-value: 7.34e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   1 MILITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPI 80
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  81 VTFLLALVSWCVLPLGEGMVysDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVL 160
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTL--NVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLV 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 161 LCSGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILM 240
Cdd:MTH00040  159 IFSGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFM 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 241 CSLTTILFLGGWLPPFNLAILywvpASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILL 320
Cdd:MTH00040  239 NLLSVILFLGGGSPFNEIFPI----NIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLS 314


                  ....*.
gi 2127873169 321 GFNWLP 326
Cdd:MTH00040  315 LLNILP 320
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-309 5.29e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 345.73  E-value: 5.29e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   1 MILITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPI 80
Cdd:MTH00111    2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  81 VTFLLALVSWCVLPLGEGMvySDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVL 160
Cdd:MTH00111   82 LALLLALTIWTPLPMPFPL--ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 161 LCSGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILM 240
Cdd:MTH00111  160 LLSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLM 239

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2127873169 241 CSLTTILFLggwlppfNLAILYWVPA--SIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSL 309
Cdd:MTH00111  240 NTLTTILFL-------NPSTLNLPPElfTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-326 4.39e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 338.12  E-value: 4.39e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   1 MILITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPI 80
Cdd:MTH00134    3 STLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPM 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  81 VTFLLALVSWCVLPLGEGMVysDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVL 160
Cdd:MTH00134   83 LALTLALTLWAPMPMPYPVT--DLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 161 LCSGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 241 CSLTTILFLGGWLPPFNLAIlywvpASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILL 320
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPEL-----TTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPI 315


                  ....*.
gi 2127873169 321 GFNWLP 326
Cdd:MTH00134  316 AFAGLP 321
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-309 7.02e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 337.75  E-value: 7.02e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   1 MILITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPI 80
Cdd:MTH00071    2 MTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  81 VTFLLALVSWCVLPLGegMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVL 160
Cdd:MTH00071   82 MALTLALIIWTPLPMP--NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 161 LCSGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILM 240
Cdd:MTH00071  160 LLTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMM 239

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2127873169 241 CSLTTILFLGgwlPPFNLAILYWVPASIWfgLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSL 309
Cdd:MTH00071  240 NTLSTILFLG---STYNHLQPELSTMNLM--IKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-309 1.51e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 328.89  E-value: 1.51e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   7 LLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLA 86
Cdd:MTH00104    3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  87 LVSWCVLPLGEGMVysDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCSGSL 166
Cdd:MTH00104   83 LTMWIPLPMPYPLI--NMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 167 NFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSLTTI 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2127873169 247 LFLGGWLPPfNLAILYwvpaSIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSL 309
Cdd:MTH00104  241 LFLGAFHNP-YMPELY----TTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-326 5.21e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 327.25  E-value: 5.21e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGegMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:MTH00218   81 LTLALLLWMPLPLP--FSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIIL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCS 242
Cdd:MTH00218  159 TGGFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNT 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 243 LTTILFLGGWLPPFNLAilywvpasiwfgLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILLGF 322
Cdd:MTH00218  239 LSVILFLGTSLTTINLM------------LKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306


                  ....
gi 2127873169 323 NWLP 326
Cdd:MTH00218  307 ASLP 310
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-319 9.84e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 326.44  E-value: 9.84e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   1 MILITTLLKILTVilplLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPI 80
Cdd:MTH00143    2 VSLLSSVFTYLCV----LLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPC 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  81 VTFLLALVSWCVLPLGegMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVL 160
Cdd:MTH00143   78 LSLILALLLWQLYPSY--FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 161 LCSGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILM 240
Cdd:MTH00143  156 FLSGSFSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFM 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2127873169 241 CSLTTILFLGGWLPPFNLailywvpASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGIL 319
Cdd:MTH00143  236 SLLTVVLFFGGSSVLFLL-------GGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-318 4.03e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 302.07  E-value: 4.03e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGEGMVysDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLI--SFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCS 242
Cdd:MTH00193  159 IGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSM 238

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2127873169 243 LTTILFLGGWLPpfnlailywvpaSIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGI 318
Cdd:MTH00193  239 LFVLMFLGGDLL------------SLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGL 302
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 4-320 2.87e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 300.03  E-value: 2.87e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   4 ITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTF 83
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  84 LLALVSWCVLPlgEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCS 163
Cdd:MTH00225   81 ILSLILWSLYP--SMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLV 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 164 GSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSL 243
Cdd:MTH00225  159 LTYNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSML 238

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2127873169 244 TTILFLGGWLppfnlailywVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILL 320
Cdd:MTH00225  239 TSILFFGGFF----------VTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 3-323 3.00e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 289.72  E-value: 3.00e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGEGMVYsdINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:MTH00195   81 LALALILWVPIPSPFGFSS--INLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQAIWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCS 242
Cdd:MTH00195  159 AGSFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSV 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 243 LTTILFLGGwlppfnlailywvPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILLGF 322
Cdd:MTH00195  239 LTTILFLGG-------------GGTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305


                  .
gi 2127873169 323 N 323
Cdd:MTH00195  306 N 306
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 4-320 1.41e-83

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 255.09  E-value: 1.41e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   4 ITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTF 83
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  84 LLALVSWCVLPLGEGMVYsdINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCS 163
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFF--LKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 164 GSLNFTEIVLAQQAiWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSL 243
Cdd:MTH00010  161 QTFSFSKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLF 239

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2127873169 244 TTILFLGgwlppfnlAILYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLVAGILL 320
Cdd:MTH00010  240 TSVFFTS--------FIPSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMF 308
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-316 3.04e-74

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 232.92  E-value: 3.04e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   3 LITTLLKILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVT 82
Cdd:CHL00032   26 LIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  83 FLLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:CHL00032  106 VISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQ--AIWyGVPLF--PI-LIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANM 237
Cdd:CHL00032  186 SNSLSTVDIVEAQSkyGFW-GWNLWrqPIgFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNL 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 238 ILMCSLTTILFLGGWLPP----FNLAILYWVPASIWFG---------LKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIF 304
Cdd:CHL00032  265 LVSSLFVTVLYLGGWNLSipyiFIPELFEINKTGGVFGttigifitlAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFL 344

                         330
                  ....*....|..
gi 2127873169 305 LPLSLGWVFLVA 316
Cdd:CHL00032  345 LPISLGNLLLTT 356
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
11-316 6.85e-73

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 228.43  E-value: 6.85e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  11 LTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLALVSW 90
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  91 CVLPLGE--------GMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLC 162
Cdd:NF040610   97 VAIPFGAviingveyPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 163 SGSLNFTEIVLAQQAIWYGVpLFPI-LIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMC 241
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFAF-LQPIgFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 242 SLTTILFLGGWLPPF---NLAILYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLS---LGWVFLV 315
Cdd:NF040610  256 FLVVLLFLGGWNLPGfvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSllnLGWAIAL 335


                  .
gi 2127873169 316 A 316
Cdd:NF040610  336 G 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 10-309 7.92e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 200.90  E-value: 7.92e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  10 ILTVILPLLIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLALVS 89
Cdd:MTH00090    2 LLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLE 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  90 WCVLPLGegMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCSGSLNFT 169
Cdd:MTH00090   82 WFVLPYF--FDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 170 EIvlaqqaiwYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSLTTILFl 249
Cdd:MTH00090  160 SS--------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF- 230

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 250 ggwlppFNLAILYWvpasiwfglktTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSL 309
Cdd:MTH00090  231 ------FKFSFLML-----------FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-315 2.06e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 158.55  E-value: 2.06e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  18 LIAIAYMTLAERKVMAAMQRRKGPNVVGIFGLLQPLADGLKLFVKETVLPSSANLVIFILAPIVTFLLALVSWCVLPLGE 97
Cdd:MTH00058   15 LLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYY 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  98 GMVYSdiNVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCSGSLNFTEIVLAqqa 177
Cdd:MTH00058   95 SGSYS--SLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYS--- 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 178 IWYGVPLFP-ILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMCSLTTILFLGGwlppf 256
Cdd:MTH00058  170 GWLSVLLFPlIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGG----- 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2127873169 257 nlailywvpaSIWFGLKTTLLLFgFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLV 315
Cdd:MTH00058  245 ----------GFVSIMLLFHLLF-FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-315 2.48e-39

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 140.32  E-value: 2.48e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169   7 LLKILTVILPLLIAIAYMTLAE---RKVMAAMQRRKGPnvvgifGLLQPLADGLKLFVKETVLPSSANlVIFILAPIVTF 83
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLgiiRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169  84 LLALVSWCVLPLGEGMVYSDINVGVLYILAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILINVLLCS 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2127873169 164 GSLNFTEIVLAQQA---IWYGVPLFPILIMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILM 240
Cdd:COG0650   154 GSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2127873169 241 CSLTTILFLggwlpPFNLAiLYWVPASIWFGLKTTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPLSLGWVFLV 315
Cdd:COG0650   234 LSLFVNLFL-----PWGIA-LTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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