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helicase-primase subunit [Papiine alphaherpesvirus 2]
Protein Classification
PHA03144 family protein ( domain architecture ID 10010436 )
PHA03144 family protein
List of domain hits
Name
Accession
Description
Interval
E-value
PHA03144
PHA03144 helicase-primase primase subunit; Provisional
2-741
0e+00
helicase-primase primase subunit; Provisional
Pssm-ID: 223000
Cd Length: 746
Bit Score: 739.63
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 2 GE EDG L AWAE E SVCA VT LY AA W L PPRT R DRLHAL L YLLCRDA R GD AV ARFAEVSV A S S ELQ - A F Y GP SEIS AA G AVAAAR 80
Cdd:PHA03144 1 MM EDG V AWAE G SVCA TS LY SL W T PPRT P DRLHAL V YLLCRDA A GD YT ARFAEVSV S S N ELQ t G F R GP ADVT AA R AVAAAR 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 81 AAA S PAA A PLE T L N DPALW R ALYAS A LAAL E R E VGR APLFA P A R V G R DP R TGLV A RIE A APGG RA - P APR G A A L S V D AKV 159
Cdd:PHA03144 81 AAA A PAA W PLE P L G DPALW K ALYAS V LAAL R R Q VGR FAFYS P L R F G V DP Q TGLV V RIE P APGG GE p A APR A A I L N V T AKV 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 160 AT DPLALAAH V A AR PGA R LA W ARLAAI Q D --- TP Q CAS A ASL T V R I D T GA ARFAREY T TL T FPPV RK EGA VG D V FEVRE A 236
Cdd:PHA03144 161 DL DPLALAAH A A SS PGA S LA R ARLAAI R D gyf TP S CAS D ASL E V E I T T KT ARFAREY D TL Q FPPV KR EGA MA D L FEVRE R 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 237 V LRPRGH a Q A VTARVLVPRG YEY F AVP AEGFSAPAL V AL F RQWH L TV H AAPGAL A PIFAFLGPE F EPRG GA VD H F A VLGF 316
Cdd:PHA03144 241 T LRPRGH - Q R VTARVLVPRG FDC F VAC AEGFSAPAL M AL Y RQWH A TV F AAPGAL V PIFAFLGPE L EPRG EE VD Y F C VLGF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 317 PGWPTLKV P A G AA AVPAA ALAA HAE L A G A WPA A GARA LA P ARL W SAAAA AA P G R L P P A LR ------------- R PA TPGL 383
Cdd:PHA03144 320 PGWPTLKV S A A AA EAVRE ALAA YVL L D G L WPA L GARA FH P LAP W APEDR AA A G S L T P R LR eaaarlqnglrdk W PA GRVS 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 384 RL LD P PAVIG P V C LA R F R F P glgarl A AALGGLGLGPGADP R DPL A RG AR rwral A EDGR PW AR A VAARALAEAREE CPA 463
Cdd:PHA03144 400 CI LD H PAVIG G V W LA K F D F S ------ A FFPTLYLALFPGHE R LAR A VR AR ----- A RREK PW LK A ALVSFFGGLQHI CPA 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 464 FA R I L DGVVS AV GLR LERAA GDADL AVC GNEGASL WGVL N VDP L DA AG --- P AA V ERARAA LET AA GEA LA GG GLL GA E E 540
Cdd:PHA03144 469 AY R A L IALAN AV SRA LERAA NAVGF AVC TYVKDGF WGVL G VDP Q DA VS ada L AA A ERARAA CQA AA EAV LA DM GLL LP E G 548
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 541 AP PP L E LEG T YTHAV L WSQ T G A W F WN A RTD ADLLE GFPLR gpa Y AAA A AA TRRALRGVV AA A A EGGA AE KA R L AA E EA L D 620
Cdd:PHA03144 549 AP LH L R LEG L YTHAV S WSQ H G Y W L WN R RTD TEDFV GFPLR --- S AAA R AA KAALRALLR AA V A DSAD AE TL R Q AA R EA C D 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 621 G LVLEAFARRLDAE Y W A V AEGP SDP G D AP PAAA L RGGALLD SERH SRRVVRVCGG a D GGS V A VP I DLYPRPLVLPPIDCA 700
Cdd:PHA03144 626 R LVLEAFARRLDAE F W S V PTPI SDP S D PL PAAA F RGGALLD ADHG SRRVVRVCGG - D CEP V P VP W DLYPRPLVLPPIDCA 704
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 83722576 701 HHLR DV LAEAE AV L R GAL AG LWG DEGG -- FA YPFE E r F L FLF D 741
Cdd:PHA03144 705 HHLR PI LAEAE SM L N GAL SA LWG EDEP fe VT YPFE D - F A FLF A 746
Name
Accession
Description
Interval
E-value
PHA03144
PHA03144 helicase-primase primase subunit; Provisional
2-741
0e+00
helicase-primase primase subunit; Provisional
Pssm-ID: 223000
Cd Length: 746
Bit Score: 739.63
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 2 GE EDG L AWAE E SVCA VT LY AA W L PPRT R DRLHAL L YLLCRDA R GD AV ARFAEVSV A S S ELQ - A F Y GP SEIS AA G AVAAAR 80
Cdd:PHA03144 1 MM EDG V AWAE G SVCA TS LY SL W T PPRT P DRLHAL V YLLCRDA A GD YT ARFAEVSV S S N ELQ t G F R GP ADVT AA R AVAAAR 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 81 AAA S PAA A PLE T L N DPALW R ALYAS A LAAL E R E VGR APLFA P A R V G R DP R TGLV A RIE A APGG RA - P APR G A A L S V D AKV 159
Cdd:PHA03144 81 AAA A PAA W PLE P L G DPALW K ALYAS V LAAL R R Q VGR FAFYS P L R F G V DP Q TGLV V RIE P APGG GE p A APR A A I L N V T AKV 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 160 AT DPLALAAH V A AR PGA R LA W ARLAAI Q D --- TP Q CAS A ASL T V R I D T GA ARFAREY T TL T FPPV RK EGA VG D V FEVRE A 236
Cdd:PHA03144 161 DL DPLALAAH A A SS PGA S LA R ARLAAI R D gyf TP S CAS D ASL E V E I T T KT ARFAREY D TL Q FPPV KR EGA MA D L FEVRE R 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 237 V LRPRGH a Q A VTARVLVPRG YEY F AVP AEGFSAPAL V AL F RQWH L TV H AAPGAL A PIFAFLGPE F EPRG GA VD H F A VLGF 316
Cdd:PHA03144 241 T LRPRGH - Q R VTARVLVPRG FDC F VAC AEGFSAPAL M AL Y RQWH A TV F AAPGAL V PIFAFLGPE L EPRG EE VD Y F C VLGF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 317 PGWPTLKV P A G AA AVPAA ALAA HAE L A G A WPA A GARA LA P ARL W SAAAA AA P G R L P P A LR ------------- R PA TPGL 383
Cdd:PHA03144 320 PGWPTLKV S A A AA EAVRE ALAA YVL L D G L WPA L GARA FH P LAP W APEDR AA A G S L T P R LR eaaarlqnglrdk W PA GRVS 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 384 RL LD P PAVIG P V C LA R F R F P glgarl A AALGGLGLGPGADP R DPL A RG AR rwral A EDGR PW AR A VAARALAEAREE CPA 463
Cdd:PHA03144 400 CI LD H PAVIG G V W LA K F D F S ------ A FFPTLYLALFPGHE R LAR A VR AR ----- A RREK PW LK A ALVSFFGGLQHI CPA 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 464 FA R I L DGVVS AV GLR LERAA GDADL AVC GNEGASL WGVL N VDP L DA AG --- P AA V ERARAA LET AA GEA LA GG GLL GA E E 540
Cdd:PHA03144 469 AY R A L IALAN AV SRA LERAA NAVGF AVC TYVKDGF WGVL G VDP Q DA VS ada L AA A ERARAA CQA AA EAV LA DM GLL LP E G 548
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 541 AP PP L E LEG T YTHAV L WSQ T G A W F WN A RTD ADLLE GFPLR gpa Y AAA A AA TRRALRGVV AA A A EGGA AE KA R L AA E EA L D 620
Cdd:PHA03144 549 AP LH L R LEG L YTHAV S WSQ H G Y W L WN R RTD TEDFV GFPLR --- S AAA R AA KAALRALLR AA V A DSAD AE TL R Q AA R EA C D 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 621 G LVLEAFARRLDAE Y W A V AEGP SDP G D AP PAAA L RGGALLD SERH SRRVVRVCGG a D GGS V A VP I DLYPRPLVLPPIDCA 700
Cdd:PHA03144 626 R LVLEAFARRLDAE F W S V PTPI SDP S D PL PAAA F RGGALLD ADHG SRRVVRVCGG - D CEP V P VP W DLYPRPLVLPPIDCA 704
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 83722576 701 HHLR DV LAEAE AV L R GAL AG LWG DEGG -- FA YPFE E r F L FLF D 741
Cdd:PHA03144 705 HHLR PI LAEAE SM L N GAL SA LWG EDEP fe VT YPFE D - F A FLF A 746
Herpes_HEPA
pfam03324 Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, ...
229-322
4.28e-27
Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, EHV-1 54, VZV 52 AND HCMV 102.
Pssm-ID: 367447 [Multi-domain]
Cd Length: 95
Bit Score: 105.56
E-value: 4.28e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 229 D V FEV REAV L RPR G HA qa VT A RVL V P RGYEYFAVPA E G F SAP ALVA L FR QW H LTVHAA PG A L A P I FA F LGP EFE P R G GAV 308
Cdd:pfam03324 4 D I FEV VDCA L VLG G RQ -- VT V RVL L P PAFDCLVTND E C F WNL ALVA F FR AL H EKIFGE PG G L V P L FA Y LGP GLN P E G EDF 81
90
....*....|....
gi 83722576 309 D H F AVL GFPG W P T L 322
Cdd:pfam03324 82 D Y F CSP GFPG F P N L 95
Name
Accession
Description
Interval
E-value
PHA03144
PHA03144 helicase-primase primase subunit; Provisional
2-741
0e+00
helicase-primase primase subunit; Provisional
Pssm-ID: 223000
Cd Length: 746
Bit Score: 739.63
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 2 GE EDG L AWAE E SVCA VT LY AA W L PPRT R DRLHAL L YLLCRDA R GD AV ARFAEVSV A S S ELQ - A F Y GP SEIS AA G AVAAAR 80
Cdd:PHA03144 1 MM EDG V AWAE G SVCA TS LY SL W T PPRT P DRLHAL V YLLCRDA A GD YT ARFAEVSV S S N ELQ t G F R GP ADVT AA R AVAAAR 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 81 AAA S PAA A PLE T L N DPALW R ALYAS A LAAL E R E VGR APLFA P A R V G R DP R TGLV A RIE A APGG RA - P APR G A A L S V D AKV 159
Cdd:PHA03144 81 AAA A PAA W PLE P L G DPALW K ALYAS V LAAL R R Q VGR FAFYS P L R F G V DP Q TGLV V RIE P APGG GE p A APR A A I L N V T AKV 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 160 AT DPLALAAH V A AR PGA R LA W ARLAAI Q D --- TP Q CAS A ASL T V R I D T GA ARFAREY T TL T FPPV RK EGA VG D V FEVRE A 236
Cdd:PHA03144 161 DL DPLALAAH A A SS PGA S LA R ARLAAI R D gyf TP S CAS D ASL E V E I T T KT ARFAREY D TL Q FPPV KR EGA MA D L FEVRE R 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 237 V LRPRGH a Q A VTARVLVPRG YEY F AVP AEGFSAPAL V AL F RQWH L TV H AAPGAL A PIFAFLGPE F EPRG GA VD H F A VLGF 316
Cdd:PHA03144 241 T LRPRGH - Q R VTARVLVPRG FDC F VAC AEGFSAPAL M AL Y RQWH A TV F AAPGAL V PIFAFLGPE L EPRG EE VD Y F C VLGF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 317 PGWPTLKV P A G AA AVPAA ALAA HAE L A G A WPA A GARA LA P ARL W SAAAA AA P G R L P P A LR ------------- R PA TPGL 383
Cdd:PHA03144 320 PGWPTLKV S A A AA EAVRE ALAA YVL L D G L WPA L GARA FH P LAP W APEDR AA A G S L T P R LR eaaarlqnglrdk W PA GRVS 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 384 RL LD P PAVIG P V C LA R F R F P glgarl A AALGGLGLGPGADP R DPL A RG AR rwral A EDGR PW AR A VAARALAEAREE CPA 463
Cdd:PHA03144 400 CI LD H PAVIG G V W LA K F D F S ------ A FFPTLYLALFPGHE R LAR A VR AR ----- A RREK PW LK A ALVSFFGGLQHI CPA 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 464 FA R I L DGVVS AV GLR LERAA GDADL AVC GNEGASL WGVL N VDP L DA AG --- P AA V ERARAA LET AA GEA LA GG GLL GA E E 540
Cdd:PHA03144 469 AY R A L IALAN AV SRA LERAA NAVGF AVC TYVKDGF WGVL G VDP Q DA VS ada L AA A ERARAA CQA AA EAV LA DM GLL LP E G 548
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 541 AP PP L E LEG T YTHAV L WSQ T G A W F WN A RTD ADLLE GFPLR gpa Y AAA A AA TRRALRGVV AA A A EGGA AE KA R L AA E EA L D 620
Cdd:PHA03144 549 AP LH L R LEG L YTHAV S WSQ H G Y W L WN R RTD TEDFV GFPLR --- S AAA R AA KAALRALLR AA V A DSAD AE TL R Q AA R EA C D 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 621 G LVLEAFARRLDAE Y W A V AEGP SDP G D AP PAAA L RGGALLD SERH SRRVVRVCGG a D GGS V A VP I DLYPRPLVLPPIDCA 700
Cdd:PHA03144 626 R LVLEAFARRLDAE F W S V PTPI SDP S D PL PAAA F RGGALLD ADHG SRRVVRVCGG - D CEP V P VP W DLYPRPLVLPPIDCA 704
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 83722576 701 HHLR DV LAEAE AV L R GAL AG LWG DEGG -- FA YPFE E r F L FLF D 741
Cdd:PHA03144 705 HHLR PI LAEAE SM L N GAL SA LWG EDEP fe VT YPFE D - F A FLF A 746
PHA03140
PHA03140 helicase-primase primase subunit; Provisional
14-740
2.43e-73
helicase-primase primase subunit; Provisional
Pssm-ID: 222998
Cd Length: 772
Bit Score: 253.71
E-value: 2.43e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 14 V CA VTL Y A AW LPP -- R T R DRLHA LLYLLC RDAR G DAVAR FAE VS V ASSE L QAFY - GPSEIS AA GAVAA -- A RAA A S P A A A 88
Cdd:PHA03140 15 I CA ASI Y S AW TQG gd R A R EYPYV LLYLLC KRGD G GYDPV FAE IT V LAED L CRYS r HAGDVT AA TLASL cr A ASS A A P D A W 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 89 PLE T L NDPAL WR A LY A SALA A L E R EV G RAPLFA P A R V G R D PR TGL - V ARIE A APGGRAP AP RGAA L SVDAK VA TDPL A LA 167
Cdd:PHA03140 95 PLE P L GNADT WR C LY G SALA T L R R RL G FFSFYS P V R F G T D TA TGL l V KAEP A PDATADA AP STGV L RAALR VA IEES A VR 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 168 A HV AA R PG AR LA W ARL A A IQ D TPQC A SAAS L TVRID T GA AR FA R E Y TTLTF PP VRKE G AVG DVF EV RE AVLRPR G HA q A V 247
Cdd:PHA03140 175 A CA AA A PG GS LA Y ARL C A LK D GHAN A PGTA L EFELT T KT AR IY R S Y ASIFS PP RERA G RLS DVF NL RE YRVCTS G GR - A T 253
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 248 TA RVL V P R G YEYFAVP A EGF S APALVALF RQW HLTVHAA PG ALAP I F A F LGPE FE P R G GAV D H F AVL GFPGW P TL KVPAG 327
Cdd:PHA03140 254 VV RVL L P V G FDCLVTD A RVT S PLSALLVY RQW YAAAFGK PG GPRQ I L A Y LGPE LS P G G EER D Y F CTV GFPGW T TL RTSTP 333
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 328 A A AVPAA AL A A HA E LA G A WP AA G AR A LAPARL W SAAAAAAPGR L PP --- A L RR -------------- PA TPGLRL LD P P A 390
Cdd:PHA03140 334 D A ESVRD AL E A YV E TD G L WP VT G IH A FHYLAP W DFHPPLPVAG L DR ria A A RR alpagggsgdgadw PA GRISTI LD S P V 413
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 391 VIGPVC LA R F R F PGLGARLAA AL GGLG lgpgadprdpl AR G AR RW RA LAED GRP WARAVAARALAEA R EEC P AFARILDG 470
Cdd:PHA03140 414 CVRDLW LA K F D F SAFFPTIYC AL FPEH ----------- AR L AR II RA RRRR GRP CLKPALVTFFGGL R HIH P PAYKAIIA 482
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 471 VVS A VGLRL ERAA GDADL A V C GNEGASL WG V --- L NVDPL -- DAA GP AA VERARAALETAAGEALAGG GL LG AE E A P P P L 545
Cdd:PHA03140 483 LAN A ISACV ERAA NERNF A I C TYVKDGF WG A fgd L VPGAV sr DAA RA AA LALRDDCERAVEAVLRDDL GL RP AE G A E P H L 562
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 546 EL EG TY THAV L W SQ TG A W F WNA R T DA - DL L E G F P L R ----------- GPAYAA A A A ATR R ALRGVVAAAAEGGAAEKARL 613
Cdd:PHA03140 563 RF EG VF THAV S W CT TG Y W L WNA T T GE s EH L V G V P C R seaardakesl AGLLCR A V A IRE R LYASTWTVSNYITWPGDTVA 642
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 614 AA EE A L D G LV LE AF A RR L D AE YW AVAEGPS D P G d A P P AA AL R GG AL LD SERHS R RV V R V C G - GADGGSVAV P ID LY PR P L 692
Cdd:PHA03140 643 AA AA A C D A LV HA AF E RR G D VR YW SATAPIG D W G - A V P RS AL S GG DM LD KDHKP R QY V L V R G h IPEAAPFPL P WT LY RA P V 721
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 83722576 693 V LPPIDC AH HL RDV L AEAEAVLR GALA G l WG D E G GFAYP FE --- ERFL FLF 740
Cdd:PHA03140 722 C LPPIDC RA HL APL L QTFARMIN GALA A - GN D F G EPPTK FE ydl ADYD FLF 771
PHA03181
PHA03181 helicase-primase primase subunit; Provisional
14-739
2.29e-38
helicase-primase primase subunit; Provisional
Pssm-ID: 165452
Cd Length: 764
Bit Score: 152.77
E-value: 2.29e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 14 V C AV TLY AA W LPPRTRDR L H AL L YLL C R DAR G DAV A RFAE V SVASSE L QAFY G -- P SE I SA A GAVAA A R AA ASPAAA P LE 91
Cdd:PHA03181 19 I C YT TLY RL W TSSNRTEG L T AL C YLL F R NVC G NYS A HYST V NFSGKS L AKAW G ln P DT I TD A TLASM A N AA SVTGRW P SC 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 92 TLNDPA LW R AL Y A SA LA A L EREV G RAPLFA P ARVGR D PR TGLV ARI E AAP G G R A p A PR GAA L SV D AKVATDPLA L - AAHV 170
Cdd:PHA03181 99 NADQHT LW K AL L A FT LA K L RHRL G YHAYYT P VNMYV D KI TGLV LSC E PLN G E R Y - K PR PGL L KT D GTINVEESS L l STAM 177
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 171 AARP GA R LA WAR L A A IQDTPQCASAAS l TVR I D T GAA RF A REY TTLTFPPVR - K EGAVGDV F E V R E AV L RPR G HAQA V TA 249
Cdd:PHA03181 178 KFTE GA T LA HIK L S A LKNIETIPEFDA - RIE I Q T KED RF Y REY KSVSSRTKK t K LHNSNNI F H V V E KP L ILD G SQAP V RT 256
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 250 RV LVP RGYEYF - AV PAE g FS AP AL V A LFRQ WH LTVHAAP G A ---- L A PIF AFL GPE FE PRG GA VD HFAVL GFPGWP TL K V 324
Cdd:PHA03181 257 LT LVP TSFDCL v TT PAE - FS LS AL L A IYAK WH EKLYSTA G G seki L T PIF TYI GPE TN PRG ED VD YACII GFPGWP MV K S 335
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 325 PAGAAAVPAA A LAAH A ELA G A WP A AG A R ALAPARL W SAAAAAA P --------- GRLPP A LR R P A TPGLR ----- LLDP P A 390
Cdd:PHA03181 336 STASHLAIKE A IDSY A ATD G L WP L AG P R TFHLLAP W RPENHPS P tidichylk AESNV A RG R I A DDWTE gritc IFRE P T 415
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 391 V I GPVCL A R F R F PGLG A R L AAA L G glglgpgad P RDPLA R G A RRW R ALA E dg RP W ARAVAARALAEAREECPAFARILD G 470
Cdd:PHA03181 416 L I ENAAI A K F D F SAFF A T L YLG L F --------- P CHSRL R D A VKA R LRR E -- KD W LKRPIVEFGGLLKHFREDVYKAII G 484
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 471 VVSAVG L RL E RA A GDADL A V C GNEGASL WG VL nvdp L D A A G ----- P AAV E RARAA L ET A AG E ALAGGGLLGAEEA P P -- 543
Cdd:PHA03181 485 IGNHIS L EV E AT A STLMF A P C TYVKDGM WG TF ---- I D K A N nvivs P EGN E NIFET L RV A CN E SANRLATSIGLRF P D gi 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 544 -- PLE LEG T YTHA VL W SQTGA W F WN AR T DADLLE GFP LRGPAYAA A AA A TRRA L RGVVAAAAEGGAAEKARLAAEEALDG 621
Cdd:PHA03181 561 nl QMR LEG V YTHA MS W NANCY W L WN RN T RESDFV GFP KQPEFATH A KE A LSTL L EEICLCNDTDESLLTIQEKVQKVFEE 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 622 L VLE AF AR R L DA EY W AVAEGPS D PGDAPP A AALRGG A LL D SERHS R RV V RVC g GA DG GS V A V PID L YP - RPLV LP P I D C A 700
Cdd:PHA03181 641 L LYM AF KK R G DA SF W SCPTESY D DTLYIV A LGSKAA A RF D TSAFR R EM V QTV - TT DG NI V P V TCS L FE g THFI LP A I S C I 719
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 83722576 701 H H LRDV L AEAEAV L RGA LA GL W G -- D E G G F AYPF E E - RF L F L 739
Cdd:PHA03181 720 D H MKPI L SAFSRL L ISV LA SK W P nv D Q G S F TFDV E H y RF M F I 761
Herpes_HEPA
pfam03324 Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, ...
229-322
4.28e-27
Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, EHV-1 54, VZV 52 AND HCMV 102.
Pssm-ID: 367447 [Multi-domain]
Cd Length: 95
Bit Score: 105.56
E-value: 4.28e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722576 229 D V FEV REAV L RPR G HA qa VT A RVL V P RGYEYFAVPA E G F SAP ALVA L FR QW H LTVHAA PG A L A P I FA F LGP EFE P R G GAV 308
Cdd:pfam03324 4 D I FEV VDCA L VLG G RQ -- VT V RVL L P PAFDCLVTND E C F WNL ALVA F FR AL H EKIFGE PG G L V P L FA Y LGP GLN P E G EDF 81
90
....*....|....
gi 83722576 309 D H F AVL GFPG W P T L 322
Cdd:pfam03324 82 D Y F CSP GFPG F P N L 95
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
