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Conserved domains on  [gi|90403565|ref|YP_529835|]
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putative small t antigen [Finch polyomavirus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03102 PHA03102
Small T antigen; Reviewed
 1-166 4.13e-54

Small T antigen; Reviewed


:

Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 168.31  E-value: 4.13e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565    1 MSTLQKLIDLLGLPPSA--TEADVRSAYRKKALEFHPDKGGDPERMKELNRLMDEFRHSQSLFCDETLDSDsddgdspgp 78
Cdd:PHA03102   1 REESKELMDLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEED--------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565   79 sqrTSTPEPGTGKDSGHGTFEPEVNSWHAIDYDRAYCRLMELKWCLESFFTSTERRKQGLTPEYLELKRRFQavpWRVFD 158
Cdd:PHA03102  72 ---SSSEEEDVPSGYVGATFGDRVNALYCKDWDTCLKNLSSLCKCIFCLLRKQHRLKQKLRPEPLVWGECYC---YKCFR 145


                 ....*...
gi 90403565  159 NVFNMDYI 166
Cdd:PHA03102 146 QWFGLDIT 153
 
Name Accession Description Interval E-value
PHA03102 PHA03102
Small T antigen; Reviewed
 1-166 4.13e-54

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 168.31  E-value: 4.13e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565    1 MSTLQKLIDLLGLPPSA--TEADVRSAYRKKALEFHPDKGGDPERMKELNRLMDEFRHSQSLFCDETLDSDsddgdspgp 78
Cdd:PHA03102   1 REESKELMDLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEED--------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565   79 sqrTSTPEPGTGKDSGHGTFEPEVNSWHAIDYDRAYCRLMELKWCLESFFTSTERRKQGLTPEYLELKRRFQavpWRVFD 158
Cdd:PHA03102  72 ---SSSEEEDVPSGYVGATFGDRVNALYCKDWDTCLKNLSSLCKCIFCLLRKQHRLKQKLRPEPLVWGECYC---YKCFR 145


                 ....*...
gi 90403565  159 NVFNMDYI 166
Cdd:PHA03102 146 QWFGLDIT 153
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 9-53 2.47e-12

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 58.64  E-value: 2.47e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 90403565     9 DLLGLPPSATEADVRSAYRKKALEFHPDK-GGDP---ERMKELNR----LMDE 53
Cdd:pfam00226   4 EILGVSPDASDEEIKKAYRKLALKYHPDKnPGDPeaeEKFKEINEayevLSDP 56
DnaJ smart00271
DnaJ molecular chaperone homology domain;
9-48 3.29e-12

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 58.40  E-value: 3.29e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 90403565      9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP-----ERMKELN 48
Cdd:smart00271   5 EILGVPRDASLDEIKKAYRKLALKYHPDKNPGDkeeaeEKFKEIN 49
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 9-53 8.59e-12

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 59.33  E-value: 8.59e-12
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 90403565   9 DLLGLPPSATEADVRSAYRKKALEFHPDK-GGDP---ERMKELNR----LMDE 53
Cdd:COG0484   4 EILGVSRDASAEEIKKAYRKLAKKYHPDRnPGDPeaeEKFKEINEayevLSDP 56
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 9-48 1.54e-11

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 56.40  E-value: 1.54e-11
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 90403565   9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGD----PERMKELN 48
Cdd:cd06257   4 DILGVPPDASDEEIKKAYRKLALKYHPDKNPDdpeaEEKFKEIN 47
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 9-48 2.73e-09

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 54.53  E-value: 2.73e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 90403565     9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN 48
Cdd:TIGR02349   4 EILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKeaeEKFKEIN 46
 
Name Accession Description Interval E-value
PHA03102 PHA03102
Small T antigen; Reviewed
 1-166 4.13e-54

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 168.31  E-value: 4.13e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565    1 MSTLQKLIDLLGLPPSA--TEADVRSAYRKKALEFHPDKGGDPERMKELNRLMDEFRHSQSLFCDETLDSDsddgdspgp 78
Cdd:PHA03102   1 REESKELMDLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEED--------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565   79 sqrTSTPEPGTGKDSGHGTFEPEVNSWHAIDYDRAYCRLMELKWCLESFFTSTERRKQGLTPEYLELKRRFQavpWRVFD 158
Cdd:PHA03102  72 ---SSSEEEDVPSGYVGATFGDRVNALYCKDWDTCLKNLSSLCKCIFCLLRKQHRLKQKLRPEPLVWGECYC---YKCFR 145


                 ....*...
gi 90403565  159 NVFNMDYI 166
Cdd:PHA03102 146 QWFGLDIT 153
PHA02624 PHA02624
large T antigen; Provisional
 1-139 2.94e-22

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 92.35  E-value: 2.94e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565    1 MSTLQKLIDLLGLPPSA--TEADVRSAYRKKALEFHPDKGGDPERMKELNRLMDEFRHS--------------------- 57
Cdd:PHA02624   7 REESKELMDLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGvksarqsfgtqdsseiptygt 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90403565   58 ---------------QSLFCDETLdsDSDDGDSPGPSQRTSTPEPGTGKDSGHGTfEPevnswhaiDYDRAYCRLMELKW 122
Cdd:PHA02624  87 peweqwweefnekwdEDLFCDEEL--SSSDDEDEPPPPSPPPSQEEESQSSSQAT-PP--------KKKKKNPAPNDFPS 155

                        170
                 ....*....|....*..
gi 90403565  123 CLESFFTSTERRKQGLT 139
Cdd:PHA02624 156 CLLAFLSHAIFSNKTLT 172
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 9-53 2.47e-12

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 58.64  E-value: 2.47e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 90403565     9 DLLGLPPSATEADVRSAYRKKALEFHPDK-GGDP---ERMKELNR----LMDE 53
Cdd:pfam00226   4 EILGVSPDASDEEIKKAYRKLALKYHPDKnPGDPeaeEKFKEINEayevLSDP 56
DnaJ smart00271
DnaJ molecular chaperone homology domain;
9-48 3.29e-12

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 58.40  E-value: 3.29e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 90403565      9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP-----ERMKELN 48
Cdd:smart00271   5 EILGVPRDASLDEIKKAYRKLALKYHPDKNPGDkeeaeEKFKEIN 49
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 9-53 8.59e-12

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 59.33  E-value: 8.59e-12
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 90403565   9 DLLGLPPSATEADVRSAYRKKALEFHPDK-GGDP---ERMKELNR----LMDE 53
Cdd:COG0484   4 EILGVSRDASAEEIKKAYRKLAKKYHPDRnPGDPeaeEKFKEINEayevLSDP 56
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 9-48 1.54e-11

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 56.40  E-value: 1.54e-11
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 90403565   9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGD----PERMKELN 48
Cdd:cd06257   4 DILGVPPDASDEEIKKAYRKLALKYHPDKNPDdpeaEEKFKEIN 47
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-53 1.85e-11

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 57.04  E-value: 1.85e-11
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 90403565   1 MSTLQKLIDLLGLPPSATEADVRSAYRKKALEFHPDKGGDP-----ERMKELNR----LMDE 53
Cdd:COG2214   1 MPDLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELkalaeELFQRLNEayevLSDP 62
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 5-49 4.65e-11

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 59.83  E-value: 4.65e-11
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 90403565    5 QKLIDLLGLPPSATEADVRSAYRKKALEFHPDKGGDPERMKELNR 49
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISR 72
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
9-47 1.64e-09

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 51.72  E-value: 1.64e-09
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 90403565   9 DLLGLPPSATEADVRSAYRKKALEFHPDK--GGDPERMKEL 47
Cdd:COG1076   8 ELLGLPPDADDAELKRAYRKLQREHHPDRlaAGLPEEEQRL 48
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 9-48 2.73e-09

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 54.53  E-value: 2.73e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 90403565     9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN 48
Cdd:TIGR02349   4 EILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKeaeEKFKEIN 46
PRK14295 PRK14295
molecular chaperone DnaJ;
10-61 6.32e-09

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 53.70  E-value: 6.32e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 90403565   10 LLGLPPSATEADVRSAYRKKALEFHPDKG-GDP---ERMKELNRLMD---------EFRHSQSLF 61
Cdd:PRK14295  14 VLGVPKDATEAEIKKAYRKLAREYHPDANkGDAkaeERFKEISEAYDvlsdekkrkEYDEARSLF 78
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 1-58 6.94e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 53.70  E-value: 6.94e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 90403565    1 MSTLQKLIDLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELNR----LMDEFRHSQ 58
Cdd:PRK14298   1 MATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPdaeEKFKEISEayavLSDAEKRAQ 65
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 9-48 2.17e-08

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 48.46  E-value: 2.17e-08
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 90403565   9 DLLGLPPSATEADVRSAYRKKALEFHPDKG-GDP---ERMKELN 48
Cdd:COG5407   4 EVLGVAKTASADEIKKAYRKLAKKYHPDRNkGDPkaeERFKEIN 47
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 9-48 1.85e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 49.37  E-value: 1.85e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDK-GGDP---ERMKELN 48
Cdd:PRK10767   8 EVLGVSRNASEDEIKKAYRKLAMKYHPDRnPGDKeaeEKFKEIK 51
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 9-48 3.07e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 45.65  E-value: 3.07e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN 48
Cdd:PRK14292   6 ELLGVSRTASADEIKSAYRKLALKYHPDRNKEKgaaEKFAQIN 48
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 9-46 4.31e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 45.50  E-value: 4.31e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKG-GDPE---RMKE 46
Cdd:PRK14301   8 EVLGVSRDASEDEIKKAYRKLALQYHPDRNpDNPEaeqKFKE 49
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 9-52 4.88e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 45.32  E-value: 4.88e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELNRLMD 52
Cdd:PRK14296   8 EVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPdahDKMVEINEAAD 54
PRK14289 PRK14289
molecular chaperone DnaJ;
1-46 6.52e-06

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 44.82  E-value: 6.52e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 90403565    1 MSTLQKLIDLLGLPPSATEADVRSAYRKKALEFHPDKG-GDP---ERMKE 46
Cdd:PRK14289   1 MAEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNpGDKeaeEKFKE 50
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 9-57 6.56e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 44.80  E-value: 6.56e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGD----PERMKELN------------RLMDEFRHS 57
Cdd:PRK14281   7 EVLGVSRSADKDEIKKAYRKLALKYHPDKNPDnkeaEEHFKEVNeayevlsnddkrRRYDQFGHA 71
PRK14297 PRK14297
molecular chaperone DnaJ;
9-48 9.90e-06

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 44.39  E-value: 9.90e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKG-GDP---ERMKELN 48
Cdd:PRK14297   8 EVLGLEKGASDDEIKKAFRKLAIKYHPDKNkGNKeaeEKFKEIN 51
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 10-48 1.09e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 44.27  E-value: 1.09e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 90403565   10 LLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN 48
Cdd:PRK14278   8 LLGVSRNASDAEIKRAYRKLARELHPDVNPDEeaqEKFKEIS 49
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 9-58 1.45e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 43.82  E-value: 1.45e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKG-GDP---ERMKELNRLMDEFRHSQ 58
Cdd:PRK14286   8 DILGVSKSANDEEIKSAYRKLAIKYHPDKNkGNKeseEKFKEATEAYEILRDPK 61
PRK14293 PRK14293
molecular chaperone DnaJ;
9-49 1.71e-05

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 43.44  E-value: 1.71e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELNR 49
Cdd:PRK14293   7 EILGVSRDADKDELKRAYRRLARKYHPDVNKEPgaeDRFKEINR 50
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 1-57 2.39e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 43.25  E-value: 2.39e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 90403565    1 MSTLQKLIDLLGLPPSATEADVRSAYRKKALEFHPDKG-GDPE---RMKELN------------RLMDEFRHS 57
Cdd:PRK14277   1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNpGDKEaeqKFKEINeayeilsdpqkrAQYDQFGHA 73
djlA PRK09430
co-chaperone DjlA;
10-47 2.71e-05

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 42.88  E-value: 2.71e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 90403565   10 LLGLPPSATEADVRSAYRKKALEFHPDK---GGDPERMKEL 47
Cdd:PRK09430 205 VLGVSESDDDQEIKRAYRKLMSEHHPDKlvaKGLPPEMMEM 245
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 9-57 3.36e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 42.83  E-value: 3.36e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN------------RLMDEFRHS 57
Cdd:PRK14291   7 EILGVSRNATQEEIKKAYRRLARKYHPDFNKNPeaeEKFKEINeayqvlsdpekrKLYDQFGHA 70
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 10-48 4.40e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 42.23  E-value: 4.40e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 90403565   10 LLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN 48
Cdd:PRK14299   9 ILGVPKNASQDEIKKAFKKLARKYHPDVNKSPgaeEKFKEIN 50
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 9-48 6.66e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 41.75  E-value: 6.66e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKG-GDPE---RMKELN 48
Cdd:PRK14284   5 TILGVSKTASPEEIKKAYRKLAVKYHPDKNpGDAEaekRFKEVS 48
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 5-58 1.57e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 40.77  E-value: 1.57e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 90403565    5 QKLIDLLGLPPSATEADVRSAYRKKALEFHPDK--GGDPE-RMKELNRLMDEFRHSQ 58
Cdd:PRK14300   3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTtdAKDAEkKFKEINAAYDVLKDEQ 59
PRK14279 PRK14279
molecular chaperone DnaJ;
11-45 2.99e-04

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 40.10  E-value: 2.99e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 90403565   11 LGLPPSATEADVRSAYRKKALEFHPDKG-GDP---ERMK 45
Cdd:PRK14279  15 LGVSSDASAEEIKKAYRKLARELHPDANpGDPaaeERFK 53
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 9-48 4.97e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 39.42  E-value: 4.97e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN 48
Cdd:PRK14283   9 EVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEgaeEKFKEIS 51
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 5-48 7.53e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 38.92  E-value: 7.53e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 90403565    5 QKLIDLLGLPPSATEADVRSAYRKKALEFHPDKGGDP---ERMKELN 48
Cdd:PRK14276   4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPgaeEKYKEVQ 50
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 9-46 1.25e-03

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 38.21  E-value: 1.25e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKG-GDPE---RMKE 46
Cdd:PRK14294   8 EILGVTRDASEEEIKKSYRKLAMKYHPDRNpGDKEaeeLFKE 49
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 9-42 1.42e-03

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 38.05  E-value: 1.42e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPDKGGDPE 42
Cdd:PRK14285   7 EILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK 40
PRK14280 PRK14280
molecular chaperone DnaJ;
9-47 5.17e-03

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 36.24  E-value: 5.17e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 90403565    9 DLLGLPPSATEADVRSAYRKKALEFHPD---KGGDPERMKEL 47
Cdd:PRK14280   8 EVLGVSKSASKDEIKKAYRKLSKKYHPDinkEEGADEKFKEI 49
PTZ00100 PTZ00100
DnaJ chaperone protein; Provisional
 10-39 8.37e-03

DnaJ chaperone protein; Provisional


Pssm-ID: 240265  Cd Length: 116  Bit Score: 34.44  E-value: 8.37e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 90403565   10 LLGLPPSATEADVRSAYRKKALEFHPDKGG 39
Cdd:PTZ00100  70 ILNISPTASKERIREAHKQLMLRNHPDNGG 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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