|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 524.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKWQFESA 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 115494847 321 KKIILLPPLIIISTMLLPMTPMMSILE 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.69e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 395.33 E-value: 6.69e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSiNPKLLITMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKWQFESA 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 115494847 321 KKIILLPPLIIISTMLLPMTPMMSIL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
4.19e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 357.69 E-value: 4.19e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKWQFeSA 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRF-KN 319
|
330 340
....*....|....*....|...
gi 115494847 321 KKIILLPPLIIISTMLLPMTPMM 343
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLPITPTI 342
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
8.51e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 351.82 E-value: 8.51e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKWQFeSA 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRT-KP 319
|
330 340
....*....|....*....|...
gi 115494847 321 KKIILLPPLIIISTMLLPMTPMM 343
Cdd:MTH00112 320 KKNTLTATLTTLSTLLLPLSPMI 342
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-306 |
3.57e-96 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 289.14 E-value: 3.57e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFP 306
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFP 306
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.93e-90 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 274.15 E-value: 2.93e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKWQFESA 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 115494847 321 KKiILLPPLIIISTMLLPMTPMMSIL 346
Cdd:MTH00200 321 SN-LLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
2.03e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 188.94 E-value: 2.03e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISkipnpiasGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINP-KLLITMAI 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 160 ASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTwNKLPL 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYK 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 115494847 240 MTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKW 315
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.97e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 187.72 E-value: 7.97e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SgewtisKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQIspsINPKLLITMAIA 160
Cdd:MTH00160 82 L------MLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTtalTMFPSVNNMKMKWQFESA 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKN 309
|
330 340
....*....|....*....|....*.
gi 115494847 321 KKIILLPPLIIISTMLLPMTPMMSIL 346
Cdd:MTH00160 310 KFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-296 |
3.17e-53 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 178.43 E-value: 3.17e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 1 MKPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTF 80
Cdd:MTH00011 3 STFPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SgewtiSKIPNPIASgLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIA 160
Cdd:MTH00011 83 P-----SLLKNITAL-MLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLM 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 115494847 241 TSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRL 296
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL 292
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-317 |
1.13e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 152.90 E-value: 1.13e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 8 IIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIinLTFSGEWTIS 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLYLSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 88 kipnpIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPsiNPKLLITMAIASVLIGGW 167
Cdd:MTH00197 80 -----LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 168 GGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLMTSLILVL 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 248 MMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKWQF 317
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLL 302
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-296 |
5.58e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 132.93 E-value: 5.58e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 6 LIIIMSTVmsGTMIVLTSSHWLLIWIGFEMNMLAV-IPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEW 84
Cdd:COG1007 106 ALLLFATL--GMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 85 TISKIPNPIASG------------LVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQI----SPS 148
Cdd:COG1007 184 NLAGIAAALAAGganspllllglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLlveaFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 149 INP---KLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM-AAILTYNP---TLMILNLTIYIAMTLSTFMLFM- 220
Cdd:COG1007 264 LAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILl 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 221 ---HNSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRL 296
Cdd:COG1007 344 lsrKGGEAEEIEdLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
1.41e-31 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 120.11 E-value: 1.41e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 23 SSHWLLIWIGFEMNMLAVIP-ILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSG-----------EWTISKIP 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 91 NPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILL-TWQKIAPL-----SVLYQISPSINPKLLITMAIASVLI 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 165 GGWGGLNQTQLRKILAYSSIAHMGWMAAIL----TYNPTLMILNLTIYIAMTLSTFMLFM-----HNSSTTTLSLSNTWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 115494847 236 KLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITA 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
4-267 |
3.37e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 122.43 E-value: 3.37e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 4 PILIIImstVMSGTMIVLTSSHWLLIWIGFEMNMLAV-IPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSG 82
Cdd:MTH00199 100 PILILI---VALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 83 EWTISKIpNPIASG-----LVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINpkLLITM 157
Cdd:MTH00199 177 ETSIQGI-NSILTGdvgkiLITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLIC 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 158 AIASVLIGGWGGLNQTQLRKILAYSSIAHMG---WMAAILTYNPTLMIL-NLTIYIAMTLSTFMLFMHNSSTTTL--SLS 231
Cdd:MTH00199 254 AVLSIIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESIQASLiYMIIYVIMSICSFSIILSLKLTKGLivEVS 333
|
250 260 270
....*....|....*....|....*....|....*.
gi 115494847 232 NTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMII 267
Cdd:MTH00199 334 GLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
16-296 |
6.62e-29 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 116.07 E-value: 6.62e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 16 GTMIVLTSSHWLLIWIGFEMNMLAV-IPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIPNPIA 94
Cdd:PRK05777 115 GMMVMVSANDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 95 SG------------LVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAP----LSVLYQISPSINPK---LLI 155
Cdd:PRK05777 195 DGsgnsllllfglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAfavlLRLLVVAFGGLSEDwqqVLA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 156 TMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTL----MILNLTIYIAMTLSTFMLFMHNSS----TTT 227
Cdd:PRK05777 275 IIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFGVISLLRRkggeAES 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 115494847 228 LSlsnTWNKL----PLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRL 296
Cdd:PRK05777 355 IS---DFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.94e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 112.43 E-value: 3.94e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 13 VMSGTMIVLTSSHWLLIWIGFEMNMLAV-IPILMKTHTPRATEASTKYFLTQATASMLLMMGI-------------IINL 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCallcgttgglhlsYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 79 TFSGEWTISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINpkLLITMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 159 IASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMI----LNLTIYIAMTLSTFMLFMHNSSTTTL--SLSN 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIqaslVYLFIYIIMSICVFSIILALNVYKNLiiEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 115494847 233 TWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
16-296 |
3.80e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.50 E-value: 3.80e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 16 GTMIVLTSSHWLLIWIGFEMNMLAV-IPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIPNPIA 94
Cdd:TIGR01770 114 GIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 95 SG------------LVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSI-------NPKLLI 155
Cdd:TIGR01770 194 NGmlnisllllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIFLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 156 TMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTL----MILNLTIYIAMTLSTFMLFM------HNSST 225
Cdd:TIGR01770 274 IIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSllrsykDEWIE 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 115494847 226 TTLSLSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRL 296
Cdd:TIGR01770 354 YISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-301 |
1.17e-24 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 103.69 E-value: 1.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 14 MSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWT-------I 86
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNmadlaarL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 87 SKIPNP---IASGLVTIALTMKLGMAPFHFWVPE-----------VTQGISLSSGM--ILLTWQKIAPLSVLYQISPsin 150
Cdd:COG0651 197 AELDPGlllAAFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFLGT--- 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 151 pkLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM-AAILTYNPTLMILNLTIYIAMTLSTFMLFM------HNS 223
Cdd:COG0651 274 --LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIlLGLGLGTPLGLAGALFHLLNHALAKALLFLaagaieRAT 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 115494847 224 STTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTA 301
Cdd:COG0651 352 GTRDLDkLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
7-295 |
3.25e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 79.32 E-value: 3.25e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 7 IIIMSTVMSGTMIVLTSSHWLLIWIGFEMnmLAVIPILMKTHT---PRATEASTKYFLTQATASMLLMMGIIINLTFS-G 82
Cdd:PRK02504 113 AAILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTGYMkrdPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSgG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 83 EWTISKIPNPIASG---LVTIALTM-------KLGMAPFHFWVPEVTQGISLSSGMILLTWQKIA----PLSVLYQISPS 148
Cdd:PRK02504 191 STQLSAIALALITSpslGLALALVFviagiafKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 149 INP--KLLIT-MAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNP----TLMILNLTIYIAMTLSTFM---L 218
Cdd:PRK02504 271 FDEqwKLLFTaLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagyASMVFYLLAYLFMNLGAFAcviL 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 115494847 219 FMHNSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMR 295
Cdd:PRK02504 351 FSLRTGTDQISdYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIR 428
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-267 |
4.23e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 76.05 E-value: 4.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 16 GTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRAT---------EASTKYFLTQATASMLLMMGIIINLTFSG-EWT 85
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGnEGM 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 86 ISKI-------------PNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLyqISPSINPK 152
Cdd:MTH00198 280 LGTIlsatlettnielrQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITSK 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 153 LLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGW------------MAAILTYNPTLMILNLTIYIAM-TLSTF--- 216
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFiligvsagtyesLQASWTYAVTYLVSALASFTVIcTLEEFgtr 437
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 217 ---------MLFMHNSSTTTLSLSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMII 267
Cdd:MTH00198 438 tptsrqrdgSFGNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
5.07e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 75.81 E-value: 5.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 51 RATEASTKYFLTQATASMLLMMGIIINLTFS-GEWTISKIPNP-------------IASGLVTIALTMKLGMAPFHFWVP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSWLYGLSgGEIELQEIVNGlintqmynspgisIALIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 117 EVTQGISLSSGMILLTWQKIAPLSVLYQIS----PSINPK---LLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALATRIFdipfYFSSNEwhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 190 -MAAILTYNP----TLMILNLTIYIAMTLSTF---MLFMHNSSTTTL-SLSNTWNKLPLMTSLILVLMMSLGGLPPLSGF 260
Cdd:CHL00049 319 vIIGIIVGDSndgyASMITYMLFYIFMNLGTFaciVLFGLRTGTDNIrDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
250 260 270
....*....|....*....|....*....|....*.
gi 115494847 261 APKWMIIQELTKNDMIILPTFMAITALLNLYFYMRL 296
Cdd:CHL00049 399 FGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-300 |
6.17e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 72.49 E-value: 6.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 48 HTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKI----PNPIASGLVTIALTM-------KLGMAPFHFWVP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaPTILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 117 E-----------------VTQGISLssgmilltwqkIAPLSVLYQISPSINPkLLITMAIASVLIGGWGGLNQTQLRKIL 179
Cdd:COG1009 236 DamegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVWLT-VVAIIGAITALFAALIALAQTDIKRVL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 180 AYSSIAHMGWM-AAILTYNPTLMILNLtiyiaMTLSTFM--LFM------HNSSTTTLS-LSNTWNKLPLMTSLILVLMM 249
Cdd:COG1009 304 AYSTVSQLGYMfLALGVGAYVAALFHL-----LTHAFFKalLFLgagsviHATGTRDIRkMGGLRKKMPITAITFLIGAL 378
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 115494847 250 SLGGLPPLSGFAPKWMIIQELTKNDM--IILPTFMAITALLNLYFYMRLSYTT 300
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
5-268 |
2.43e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 70.74 E-value: 2.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 5 ILIIIMSTVMSGtmiVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIInLTFSGEW 84
Cdd:TIGR01972 110 ALLLLLEAGVIG---VFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILG-LYFLGGG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 85 TIS---KIPNPIASGLVT-------IALTMKLGMAPFHFWVPEV-TQGISLSSGMILLTWQKIAP-------LSVLYQIS 146
Cdd:TIGR01972 186 TFDlleLLNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAhVEAPTAGSVILAGVLLKMGTygflrfnLPLFPDAS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 147 PSINPkLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMA-AILTYNPTLMILNLTIYIAMTLSTFMLFMH---- 221
Cdd:TIGR01972 266 LYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlGIFSFNELGISGAVFQMISHGLITAALFLLvgvl 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 115494847 222 NSSTTTLSLS---NTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQ 268
Cdd:TIGR01972 345 YERAHTRDIAkygGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-299 |
7.52e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.36 E-value: 7.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 49 TPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIP----------NPIASGLVTIALTMKLGMAPFHFWVPEv 118
Cdd:PRK08376 167 TWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAvkmsenptvvAKIALALFIAGLAMKSGAVPVHMWLPD- 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 119 TQGISLSSGMILLTWQKIAPLSVLYQIS-----PSINPK----LLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:PRK08376 246 AYPAAPSSISAMLLVIKQAGLYALARVLfsiygPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 190 M-----AAILTYNPTLM--------------ILNLTIYIAMTLSTFMLFMHNSSTTTLS-LSNTWNKLPLMTSLILVLMM 249
Cdd:PRK08376 326 MllglgVGLAALGDPAMasygeialaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNeLGGLARTMPKTTIAFLIGAA 405
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 115494847 250 SLGGLPPLSGFAPKWMIIqELTKNDMIILPTFMAITALLNLYFYMRLSYT 299
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIY-ESSALFNPILGVIAMIGSVLTLASFVKVFHT 454
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-263 |
7.91e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 69.57 E-value: 7.91e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 62 TQA----TASMLLMM-GIIINLTFSGEWTISKIP-NPIASGLVTIALTM-------KLGMAPFHFWVPE----------- 117
Cdd:PRK12644 160 LQAllvtTAGGLAMLvGIIILGQAAGTYRLSELLaDPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGamaaptpvsay 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 118 ------VTQGISLssgmilltwqkIAPLSVLYQISPSINPkLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMA 191
Cdd:PRK12644 240 lhaaamVKAGIYL-----------VARLAPGFADVPVWRP-TVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLT 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 192 AILTY-NPTLMILNLTIYIAMTLSTFMLFM------HNSSTTTL-SLSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPK 263
Cdd:PRK12644 308 VLVGIgTRDAALAGLAMLLAHALFKAALFLvvgiidHSTGTRDIrKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
5-288 |
1.57e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 68.18 E-value: 1.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 5 ILIIIMSTVMSGtmiVLTSSHWLLIWIGFEmnmLAVIPILMKTH---TPRATEASTKYFLTQATASMLLMMGIIINLTFS 81
Cdd:COG1008 115 ALLLLLEAGMIG---VFLALDLFLFYVFWE---LMLIPMYFLIGiwgGERRIYAAIKFFLYTLAGSLLMLVAILALYFLA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 82 GEWT-----ISKIPNPIAS-----GLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMIL--------------------- 130
Cdd:COG1008 189 GALTfdiaeLAAAPLPLTAqlllfLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLagvllkmggygllrfalplfp 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 131 LTWQKIAPLsvlyqispsinpklLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM-AAILTYNPTLMILNLTIYI 209
Cdd:COG1008 269 EASAYFAPL--------------LAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLQGAVLQMV 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 210 AMTLSTFMLFM------HNSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIIlpTFM 282
Cdd:COG1008 335 SHGLITAALFLlvgvlyDRTHTRDIAdLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWL--AIL 412
|
....*.
gi 115494847 283 AITALL 288
Cdd:COG1008 413 AALGLI 418
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-298 |
4.85e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 66.83 E-value: 4.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 49 TPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKI-----PNP---IASGLVTIALTMKLGMAPFHFWVPEV-T 119
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaENPtvvTAFGFVLLALALKAAVFPLHTWLPRAyP 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 120 QGISLSSGMILLTWQKIAP------LSVLYQISPSINPKL---LITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08375 231 AAPPVVTALLSGLVTKVAVyaliriYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 191 AAILTYNPTLMILNLTIYI--------AMTLSTFMLFMHNSSTTTLSLSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAP 262
Cdd:PRK08375 311 LLGLALLTPLALAAGLLHLlhhalmkgALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVS 390
|
250 260 270
....*....|....*....|....*....|....*.
gi 115494847 263 KWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSY 298
Cdd:PRK08375 391 KWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
13-284 |
6.64e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.48 E-value: 6.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 13 VMSGTMIVLTSSHWLLIWIGFEMNMLAV-IPILMKTHTPRatEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIPN 91
Cdd:PRK08668 107 SLAGVLGVFLANDLLTLYIFWEIMTFSSfMMVPMGKKESR--KASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 92 P-----------IASGLVTIALTMKLGMAPFHFWVPEV--------------------TQGISLSSGMILLTwqKIAPLS 140
Cdd:PRK08668 185 GlindtstgfalIVFLFLLAFGVAKAGIFPLHVWAPDAyseapqsfsavlsgqlsklgAYGFLLVLYVLPGT--KLFSEF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 141 VLYQISPSINpKLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGW-MAAILTYNPT------LMILNLTIYIAMTL 213
Cdd:PRK08668 263 GTYRGVPLFN-YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLgfagglFHVFNHALFKGLFF 341
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 115494847 214 STFMLFMHNSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAI 284
Cdd:PRK08668 342 LIFAAVIYRTGTTKISeMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFF 413
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-299 |
7.98e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 63.07 E-value: 7.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 50 PRATEASTKYFLTQATASMLLMMGIII----------------NLTFSGEWTISKIPNP-----IASGLVTIALTMKLGM 108
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmadlsakIRGLSFPLTGGLAGNPplalgVALALALWAFTIKAAI 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 109 APFHFWVPEV-----------TQGISLSSGMILLtwqkIAPLSVLYQISPSINPKLLITMAI------ASVLIGGWGGLN 171
Cdd:PRK12667 240 FPNHFWLPDAhpaapspvsamLSGLVVNVGAYAI----IRFLYTIFGISPSLIDFRAALSPIliilgaVSAIIGALMMVV 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 172 QTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIY-IAMTLSTFMLFM-------HNSSTTTLSLSNTWNKLPLMTSL 243
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHiINHAIAKSLLFLasgvfihAAGTRDIDELAGLGRKMPIASFA 395
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 115494847 244 ILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYT 299
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
142-296 |
3.82e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 60.73 E-value: 3.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 142 LYQISPSINPKLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNpTLMILNLTIYIA---MTLSTFML 218
Cdd:PRK12663 263 LFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFYLvhdMVVKTALF 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 219 F-----MHNSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYF 292
Cdd:PRK12663 342 LiagslVRLTGYRSLQyLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYS 421
|
....
gi 115494847 293 YMRL 296
Cdd:PRK12663 422 LFRI 425
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
97-263 |
2.21e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.90 E-value: 2.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 97 LVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISP--SINPK---LLITMAIASVLIGGWGGLN 171
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPvfHDVAVwnwLLIIVGMITALMGAVFAVQ 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 172 QTQLRKILAYSSIAHMGWM-AAILTYNPTLMILNLTIYIAMTLSTFMLFM------HNSSTTTLS-LSNTWNKLPLMTSL 243
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIvATIGVGTPFALTAAVVHTLAHALFKSSLFMligvvdHQAGTRDIRrLGSLWRRMPFTFVS 372
|
170 180
....*....|....*....|
gi 115494847 244 ILVLMMSLGGLPPLSGFAPK 263
Cdd:PRK12650 373 VTIAALSMAAVPPLFGFVSK 392
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
4.72e-09 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 51.87 E-value: 4.72e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 115494847 291 YFYMRLSYTTALTMFPSVNNMKMKWQFESAKKIILLPPLIIISTMLLPMTP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-288 |
8.95e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 50.42 E-value: 8.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 2 KPPILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIiNLTFS 81
Cdd:PRK12561 85 KPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGL-ALALS 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 82 GEWTISKIPN------PIASGLVT-----IALTMKLGMAPFHFWVP----EVTQGISLSSGMILLTWQKIAPLSVLYQIS 146
Cdd:PRK12561 164 GDTFTFDLAElgaksyPLALELLLyagflIAFGVKLPIFPLHTWLPdahgEASAPVSMILAGVLLKMGGYALIRFNVQML 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 147 PSINPKL---LITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGW-MAAILTYNptlmilNLTIYIAM-------TLST 215
Cdd:PRK12561 244 PDAHVYFapaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFvLLGIAAFT------DLGISGAMlqmishgLIAA 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 115494847 216 FMLFMHNSS---TTTLSLSNTWN---KLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDmIILPTFMAITALL 288
Cdd:PRK12561 318 ALFFLTGVTyerTHTLSIPNMGGlakVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSD-VYSSTFRTITILL 395
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
60-260 |
1.42e-06 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 49.91 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 60 FLTQATASMLLMMGIIINLTFSGEWTISKI--------PNPIASGLVTIAL----TMKLGMAPFHFWVPEVTQG------ 121
Cdd:PRK07390 177 FLTKRVGDLLLLMGVVALSPLAGTLNFSDLaawaatanLDPLTATLLGLALiagpTGKCAQFPLHLWLDEAMEGpnpasi 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 122 ----ISLSSGMILLTwqKIAPlsvLYQISPsINPKLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGW--MAAILT 195
Cdd:PRK07390 257 lrnsVVVATGAWVLI--KLQP---VLALSP-VALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLvfIAVGLQ 330
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 115494847 196 YNPTLMILNLTIYIAMTLstfmLFMH------NSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGF 260
Cdd:PRK07390 331 QPDIALLLLLTHAIAKAL----LFMSvgsiilTTITQDLTeLGGLWSRMPATTLAFLVGSAGLVALLPLGGF 398
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
29-298 |
1.83e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 29 IWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIPNPI-----------ASGL 97
Cdd:PRK06277 125 LYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptspviygGLLL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 98 VTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQI-----SPSINPK---LLITMAIASVLIGGWGG 169
Cdd:PRK06277 205 LIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSaqgVLIALSVLAMVFGVVMA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 170 LNQTQLRKILAYSSIAHMGWMAAILTYNPTLMI-------LNLTIYIAMTLSTFMLFMHNSSTTTLS-LSNTWNKLPLMT 241
Cdd:PRK06277 285 LLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYKSALFLGAGIVSYRTKTSNLRkLGGLLPVMPVVA 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 115494847 242 SLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSY 298
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-267 |
3.30e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.50 E-value: 3.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 152 KLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYI-AMTLSTFMLFM-------HNS 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvNHSIVKSALFMvsgsisyHFG 359
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 115494847 224 STTTLSLSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMII 267
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
6-288 |
3.41e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.55 E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 6 LIIIMSTVMSGTMIVLTSSHWLLIWIGFE-MNMLAVIPILMKTHTPRATEAstkyFLTQATASMLLMM-GIIINLTFSGE 83
Cdd:PRK06459 74 LSSLYILTILGMAIVLTSDNYLLFLAGWEiMTIPSYVAIALTKKNKRPAFV----FMAFGELSTVLILaGFAWAFIISGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 84 WTISKIPNPIASGLVTIALTMKLGMAPFHF--WVPEV------TQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLI 155
Cdd:PRK06459 150 TNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAhgnapsNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 156 -TMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAA-----ILTYNPTLMI-----LNLTIY-IAMTLSTFMLFMHNS 223
Cdd:PRK06459 230 lAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIehfslITVILYsFAHSVAKTGLFLSSG 309
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 115494847 224 STTTLSLSNTWNKLPLMTSLILVLM-MSLGGLPPLSGFAPKWMIIQELTKNdMIILPTFMAITALL 288
Cdd:PRK06459 310 LQEKQSITYSKKIRNRWIELGLTLLaSSLSGLLPNIGGVASWLLLESLFMF-AYVLHNVISILFIV 374
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
4.60e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.94 E-value: 4.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 56 STKYFLTQATASMLLMMGIIINLTFSGEWTISKIPNPIA------SGLVTI-------ALTMKLGMAPFHFWVPEVTQG- 121
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAelsagqTGLITVvailflfVFATKAGLFPLYFWLPGSYYAp 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 122 ----ISLSSGmiLLT----WQKIAPLSVLYQISPSINPKLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM-AA 192
Cdd:PRK07691 240 piaiAALFGA--LLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlVG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 193 ILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKL-------PLMTSLILVLMMSLGGLPPLSGFAPKWM 265
Cdd:PRK07691 318 VAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMgglikryPVLGWMFFIAALSLAGIPPLSGFYGKFF 397
|
250 260 270
....*....|....*....|....*....|.
gi 115494847 266 IIQELTKNDMIILPTFMAITALLNLYFYMRL 296
Cdd:PRK07691 398 IVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
153-268 |
5.89e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.57 E-value: 5.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 153 LLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMaailtynptLMILNLTIYIAMTLSTFMLFMHNSSTTTLSL-- 230
Cdd:PRK12665 275 LLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYM---------VFGIALSTVAGLSGAIYYVAHHITVQTTLFLvv 345
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 115494847 231 --------SNTWNKL-------PLMTSLILVLMMSLGGLPPLSGFAPKWMIIQ 268
Cdd:PRK12665 346 glierqagSSSLRRLgglakasPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
5-267 |
6.93e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 44.42 E-value: 6.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 5 ILIIIMSTVMSGtmiVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGII----INLTF 80
Cdd:PRK05846 115 AALLWLEGGVIG---VFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 81 SGEWTISKIPN-PIASGLVT-------IALTMKLGMAPFHFWVPEV-----TQGISLSSGMILltwqKIAP---LSVLYQ 144
Cdd:PRK05846 192 TGTFDIADLLNlPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPDAhvqapTAGSVLLAGILL----KMGAyglLRFSLP 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 145 ISPSINPK---LLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGW-MAAILTYNpTLMILNLTIY-IAMTLSTFMLF 219
Cdd:PRK05846 268 LFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFvTLGIFAGN-QLGIQGAIFQmISHGLSSAALF 346
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 115494847 220 M------HNSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMII 267
Cdd:PRK05846 347 LlvgvlyDRLHTRDIAdYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
7.29e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.43 E-value: 7.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 107 GMAPFHFWVPEVTQGISLSSGMILLTW-QKIAPLSVLYQISPSINPKL-----LITMAIASVLIGGWGGLNQTQLRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 181 YSSIAHMGWMAAILTYNPTLMILNLTIYIAMTL--STFMLFMHNSSTTTLSLS--NTW---------------NKLPLMT 241
Cdd:PRK08042 275 YHTLENIGIILLGLGAGVTGIALEQPALIALGLvgGLYHLLNHSLFKSVLFLGagSVWfrtghrdieklggigKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 115494847 242 SLILVLMMSLGGLPPLSGFAPKWMIIQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
18-303 |
1.71e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 43.53 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 18 MIVL-TSSHWLLIWIGFE-MNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIPNPIAS 95
Cdd:MTH00020 124 MVVLvTSDNYLQLFIGWEgVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVS 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 96 G----------LVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIA----- 160
Cdd:MTH00020 204 ApssditliclFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgsl 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 161 SVLIGGWGGLNQTQLRKILAYSSIAHMGWMaailtynptLMILNLTIYiamTLSTFMLFMHNSSTTTLSLS--------- 231
Cdd:MTH00020 284 TVFFAATVGLVQNDLKKVIAYSTCSQLGYM---------VVACGLSHY---SISLFHLMNHAFFKALLFLSagsvihals 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 232 ---------NTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAI-TALLNLYFYMRLSYTTA 301
Cdd:MTH00020 352 deqdmrkmgGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCfSALLTAFYSIRLIYLTF 431
|
..
gi 115494847 302 LT 303
Cdd:MTH00020 432 LS 433
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
96-266 |
3.36e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.38 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 96 GLVTIALTMKLGMAPFHFWVP----EVTQGISLSSGMILL-----------------TWQKIAPLsvlyqispsinpklL 154
Cdd:PRK06473 209 APILVGFGIKIPLVPFHTWLPdahvEASTPVSVLLAGVLLklgtygllrfgvglfpeAWVYLAPW--------------L 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 155 ITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTI-YIAMTLSTFMLFM------HNSSTTT 227
Cdd:PRK06473 275 ATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFqMISHGLISALLFLlvgvvyKKTGSRD 354
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 115494847 228 LS----LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMI 266
Cdd:PRK06473 355 VDvlrgLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-298 |
3.80e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.22 E-value: 3.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 98 VTIALTMKLGMAPFHFWVPE-----------VTQGISLS---SGMILLTWqKIAPLSVlYQISPSInpkllITMAIASVL 163
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKahveapvagsvLLAGILLKlggYGLVRLSW-PILPLGA-QNLAPAV-----IAMGIVGIV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 164 IGGWGGLNQTQLRKILAYSSIAHMGWMA-AILTYNPTLMILNLTIYIAMTLSTFMLF-----MHNSSTTTL-----SLSN 232
Cdd:MTH00226 309 YGSFATCRQIDVKRLVAYSSVAHMGLVSiTLVTHDIIGLTGSIFIMLAHGIVSSLLFilvtiLYDRHHTRLikyyrGLSI 388
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 115494847 233 TwnkLPLMTSLILVLMMSLGGLPPLSGFAPKWM-IIQELTKNDMI--ILPTFMAITALLNLYFYMRLSY 298
Cdd:MTH00226 389 T---MPIWGTIMIVTSLANVAVPPSGNFIGEYLsILSSFNWNPIIgvFVCSGVILSAVYSFYFANRVTF 454
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
4-270 |
4.83e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 42.03 E-value: 4.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 4 PILIIIMS-TVMSGTMIVLtsshwLLIWIgfEMNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIINLTFSG 82
Cdd:PRK08667 118 ALFILSMLgVVASANTFSF-----LFFWE--IMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 83 EWTISkiPNPIASGLVT-------IALTMKLGMAPFHFWVPEVTQGI-----SLSSGMILltwqKIAPLSVLYQISPSIN 150
Cdd:PRK08667 191 SFELS--PLGASAGILSlvflllfLGFGIKAGIIPFHKWLPYAHPASpsnvsALMSGVML----KVAVYGLVRFLMDVLS 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 151 PKL-----LITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMG--------WMAAILTYNPTLMILNL--TIYIAMTLST 215
Cdd:PRK08667 265 PELwwgvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLDTLALLALggALFHSLNHAL 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 115494847 216 F--MLFMHNSSTTTLSLSNTWNKL-------PLMTSLILVLMMSLGGLPPLSGFAPKWMIIQEL 270
Cdd:PRK08667 345 FksLLFLTAGSVVHATGTRNIEKMgglvklmPYTSALFLVGAVSIAALPPFNGFASELLLYESF 408
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
150-291 |
1.01e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.90 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 150 NPKLLITmAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYN-PTLMILNLTIYIAMTLSTF-----MLFMHNS 223
Cdd:MTH00207 243 NPALLLT-ASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFvcagsLIHSHHH 321
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 224 STTTLSLSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQE--LTKNDMIILPTFMAITALLNLY 291
Cdd:MTH00207 322 SQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESslFYPHNSLMILMIFLATALTAAY 391
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-297 |
1.02e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.96 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 14 MSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPRATEASTKYF-LTQATASMLLMMGIII------NLTFSGEWTI 86
Cdd:PRK06589 126 ILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLkILMISALLLFLPAVILiytktgNLDFVSGGLF 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 87 SKIPNpIASGLVTIALTMKLGMAPFHFWVPE-----------------VTQGISLSSGMILLTWqKIAPLSVLYQISpsi 149
Cdd:PRK06589 206 SKNQS-IILLLMFIYGIAKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIF-GLSYLQRIFAEF--- 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 150 npKLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM---AAILTynPTLMILNLTIYIAMTLSTFMLFMHNSSTT 226
Cdd:PRK06589 281 --NWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLAllsAFILT--PKALGAAILHLVSHSFAKICLFYSMGSIY 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 227 TLS-------LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAI-----TALLNLYFYM 294
Cdd:PRK06589 357 SLKkedqvdkLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviasSILSALYLLK 436
|
...
gi 115494847 295 RLS 297
Cdd:PRK06589 437 ILS 439
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
49-268 |
1.46e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 40.26 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 49 TPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIP--NPIASGLVTIALTMKLGMAPFHFWVPE------VTQ 120
Cdd:PRK12668 138 TKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAglGGTAAWLILIGFGVNAAFPPLHAWLPDaypeatVTG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 121 GISLSSgmilLTwQKIApLSVLYQISPSInpKLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTL 200
Cdd:PRK12668 218 SVFLSA----FT-TKTA-VYALARAFPGT--ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 201 MI-------LNLTIYIAmtlstfMLFM------HNSSTTTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMI 266
Cdd:PRK12668 290 AIngavahaFNHILYKG------LLFMsagavlYRTGTEKLTeLGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMI 363
|
..
gi 115494847 267 IQ 268
Cdd:PRK12668 364 IS 365
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-265 |
1.82e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.20 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 48 HTPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIPNP--------------IASGLVTIALTMKLGMAPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 114 WVPEVTQGISLSSGMILLTWQKIAPLSVLYQISP--SINPKLLITMA---IASVLIGGWGGLNQTQLRKILAYSSIAHMG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPifSGTEAWFILVSgtgMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 189 WMAAILTYN-----------PTLMILNLTIYIAMTLSTFMLFMHNSSTTTL-SLSNTWNKLPLMTSLILVLMMSLGGLPP 256
Cdd:PRK12649 316 YLMTMYGYTtyhepglgvaaATFHLLNHATFKACLFLVAGIVAHEAATRDIrKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*....
gi 115494847 257 LSGFAPKWM 265
Cdd:PRK12649 396 LNGFLSKEM 404
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
49-267 |
2.35e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 39.75 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 49 TPRATEASTKYFLTQATASMLLMMGIIINLTFSGEWTISKIP------NP----IASGLVTIALTMKLGMAPFHFWVPEV 118
Cdd:PRK08377 153 TGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAqlagtiDPtvaqVGLALLIFGLAVEAELFPLNAWAPDA 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 119 TQG------ISLSSGMILLTWQKIAPLSVLYQISPSINP--KLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08377 233 YQAaphpitVMFSAFVVKAGLYAMARILYLMQNANGWSSvlKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 191 AAILTYNPTL--------MILNLTIYIAMTLSTFMLFMHNSSTTTLSLSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAP 262
Cdd:PRK08377 313 ALALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWS 392
|
....*
gi 115494847 263 KWMII 267
Cdd:PRK08377 393 KFRII 397
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
18-268 |
2.80e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.56 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 18 MIVLTSSHWLLIWIGFE-MNMLAVIPILMKTHTPRATEASTKYFLTQATASMLLMMGIIIN---------LTFSGEWTIS 87
Cdd:MTH00032 125 MVLVTSDNYLQLFIGWEgVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsldfLTFNGGSVGS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 88 KI----------------PNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSIN- 150
Cdd:MTH00032 205 GImdrgyygggayesplaPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEk 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 151 -PKLLITMAIASVLIGGWG---GLNQTQLRKILAYSSIAHMGWMAAIL----TYNPTLM-ILNLTIYIAMTLSTFMLFMH 221
Cdd:MTH00032 285 aPLTLLIITIFGALTAFFAatvGLVQNDLKKVIAYSTCSQLGYMVLIIgiegSHNVGLFhLVNHAFFKALLFLSAGSVIH 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 115494847 222 NSSTTTLSLSNTW---NKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQ 268
Cdd:MTH00032 365 STTVDEQDMRKMGgliHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
102-317 |
4.48e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 38.31 E-value: 4.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 102 LTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITMAIASVLiggwGGLNQTQLRKILAY 181
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFF----QMFLLKSYKNLLIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 182 SSIAHMGWMaaILTYnptLMILNLTIYIAMTLSTFMLFMHNSstttLSLSNTWNKLPLMTSLILVlmmslgGLPPLSGFA 261
Cdd:MTH00091 143 SSTESFNWL--ILSF---FFSFFNVFFLFFYYFLLMLFLIPK----FNNVNKLNFVSWETLLVFM------NLPFSVTFF 207
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 115494847 262 PKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKWQF 317
Cdd:MTH00091 208 VKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFF 263
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
153-288 |
6.37e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 38.36 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 153 LLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIY-IAMTLSTFMLFM------HNSST 225
Cdd:PRK12647 261 ILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlVAHSLYKGALFMvagiidHETGT 340
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 115494847 226 TTLS-LSNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDmiILPTFMAITALL 288
Cdd:PRK12647 341 RDITkLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAP--LWSLILTVAAVL 402
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-298 |
6.45e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.12 E-value: 6.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 100 IALTMKLGMAPFHFWVPE-----------VTQGISLS---SGMILLTWqKIAPLSVLYqISPsinpkLLITMAIASVLIG 165
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQahveapvagsvILAGILLKlggYGFLRFSW-PLFPAASEY-FAP-----LIVMLSVIAVIYG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 166 GWGGLNQTQLRKILAYSSIAHMGWMaailtynpTLMILNLTIYiAMTLSTFMLFMHNSSTTTLSLSNTW----------- 234
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLV--------PLGLFTHTIE-GLVAAVFLMLAHGFVSSALFIAVTFlyerhhtrlik 360
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 115494847 235 ------NKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKND--MIILPTF-MAITALLNLYFYMRLSY 298
Cdd:MTH00204 361 yyrgltLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSlgLGVLVTSgMVWSAAYSLYLYNRISF 433
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
4-190 |
7.55e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 38.20 E-value: 7.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 4 PILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLaVIPILMKTHTPRAT-EASTKYFLTQATASMLLMMGIIINLTFSG 82
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTV-FSAMLIAILSARENiDAALKYIFIASTAMIFAFIGLIFLFSLTR 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 83 E--------WT-ISKIPNPIASGLVTIALTM-------KLGMAPFHFWVPEV-TQGISLSSGMILLTWQKIAPLSVLY-- 143
Cdd:PRK08676 181 QalgtgtlnWTeLAAHASLLSPSVLGASFLFifigflaKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRls 260
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 115494847 144 ------QISPSINPkLLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08676 261 allrqsGAAEQFSN-VLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
58-272 |
7.62e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.20 E-value: 7.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 58 KYFLTQATASMLLMMGIIINLTFSGEWTISKIPN-----------PIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSS 126
Cdd:PRK12646 165 QSFMITVFGGLALLVGFIMLYIMTGTNNITEILGqadhiknhglfIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVS 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 127 GMILLTWQKIAPLSVLYQISPSINPK-----LLITMAIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAI------LT 195
Cdd:PRK12646 245 AYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMvgigggYA 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115494847 196 YNPT-------LMILNLTIYIAMTLSTF--MLFM------HNSSTTTLSLSNTWNKL-PLMTSLILVLMMSLGGLPPLSG 259
Cdd:PRK12646 325 QHQQdaiasiyVFVLFAALFHLMNHAIFkcALFMgvgiidHEAGTRDIRILSGMRQLfPKMNLVMTIAALSMAGVPFLNG 404
|
250
....*....|...
gi 115494847 260 FAPKWMIIQELTK 272
Cdd:PRK12646 405 FLSKEMFLDALTQ 417
|
|
| |
