5DQ0: Structure of human neuropilin-2 b1 domain with novel and unique zinc binding site

PDB ID: 5DQ0Download
MMDB ID: 143472
PDB Deposition Date: 2015/9/14
Updated in MMDB: 2016/10
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 5DQ0: monomeric; determined by author and by software (PISA)
Molecular Components in 5DQ0
Label Count Molecule
Protein (1 molecule)
1
Neuropilin-2
(Gene symbol: NRP2)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
3
ZINC IONZINC ION
2
2
CHLORIDE IONCHLORIDE ION
3
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
1
2-(N-MORPHOLINO)-ETHANESULFONIC ACID2-(N-MORPHOLINO)-ETHANESULFONIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303