5GIP: Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates

PDB ID: 5GIPDownload
MMDB ID: 143051
PDB Deposition Date: 2016/6/24
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 3.129  Å
Source Organism:
Similar Structures:
Biological Unit for 5GIP: decameric; determined by author and by software (PISA)
Molecular Components in 5GIP
Label Count Molecule
Proteins (6 molecules)
2
C/D BOX Methylation Guide Ribonucleoprotein Complex Anop56 Subunit
Molecule annotation
2
50S Ribosomal Protein L7ae
Molecule annotation
2
Fibrillarin-like Rrna/trna 2'-o-methyltransferase
Molecule annotation
Nucleotides(4 molecules)
2
C/D RNA
Molecule annotation
2
Substrate
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
S-ADENOSYL-L-HOMOCYSTEINES-ADENOSYL-L-HOMOCYSTEINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303