5MP9: 26S proteasome in presence of ATP (s1)

PDB ID: 5MP9Download
MMDB ID: 147916
PDB Deposition Date: 2016/12/16
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 4.1  Å
Source Organism:
Similar Structures:
Biological Unit for 5MP9: 34-meric; determined by author and by software (PISA)
Molecular Components in 5MP9
Label Count Molecule
Proteins (34 molecules)
2
Proteasome Subunit Alpha Type-1
(Gene symbol: SCL1)
Molecule annotation
2
Proteasome Subunit Alpha Type-2
(Gene symbol: PRE8)
Molecule annotation
2
Proteasome Subunit Alpha Type-3
(Gene symbol: PRE9)
Molecule annotation
2
Proteasome Subunit Alpha Type-4
(Gene symbol: PRE6)
Molecule annotation
2
Proteasome Subunit Alpha Type-5
(Gene symbol: PUP2)
Molecule annotation
2
Proteasome Subunit Alpha Type-6
(Gene symbol: PRE5)
Molecule annotation
2
Probable Proteasome Subunit Alpha Type-7
(Gene symbol: PRE10)
Molecule annotation
2
Proteasome Subunit Beta Type-1
(Gene symbol: PRE3)
Molecule annotation
2
Proteasome Subunit Beta Type-2
(Gene symbol: PUP1)
Molecule annotation
2
Proteasome Subunit Beta Type-3
(Gene symbol: PUP3)
Molecule annotation
2
Proteasome Subunit Beta Type-4
(Gene symbol: PRE1)
Molecule annotation
2
Proteasome Subunit Beta Type-5
(Gene symbol: PRE2)
Molecule annotation
2
Proteasome Subunit Beta Type-6
(Gene symbol: PRE7)
Molecule annotation
2
Proteasome Subunit Beta Type-7
(Gene symbol: PRE4)
Molecule annotation
1
26S Protease Regulatory Subunit 7 Homolog
(Gene symbol: RPT1)
Molecule annotation
1
26S Protease Regulatory Subunit 4 Homolog
(Gene symbol: RPT2)
Molecule annotation
1
26S Protease Regulatory Subunit 6B Homolog
(Gene symbol: RPT3)
Molecule annotation
1
26S Protease Subunit Rpt4
(Gene symbol: RPT4)
Molecule annotation
1
26S Protease Regulatory Subunit 6A
(Gene symbol: RPT5)
Molecule annotation
1
26S Protease Regulatory Subunit 8 Homolog
(Gene symbol: RPT6)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
5
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
6
MAGNESIUM IONMAGNESIUM ION
3
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303