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5VIY:
BG505 SOSIP.664 in complex with broadly neutralizing antibodies BG1 and 8ANC195
PDB ID:
5VIY
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MMDB ID:
152034
PDB Deposition Date:
2017/4/17
Updated in MMDB:
2019/12
Experimental Method:
electron microscopy
Resolution:
6.2 Å
Source Organism:
Human immunodeficiency virus 1
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Taxonomy
Molecule
Human immunodeficiency virus 1
A, B, C, D, E, F
Homo sapiens
G, H, I, J, K, L, M, N, O, P
Similar Structures:
VAST+
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Biological Unit for 5VIY: hexadecameric; determined by author
Molecular Components in 5VIY
Label
Count
Molecule
Proteins (16 molecules)
A
B
C
3
Envelope Glycoprotein Gp160
D
E
F
3
Envelope Glycoprotein Gp160
G
I
2
BG1 FAB Light Chain
H
J
2
BG1 FAB Heavy Chain
K
M
O
3
8anc195 G52k5 FAB Heavy Chain
L
N
P
3
8anc195 G52k5 FAB Light Chain
Chemicals and Non-standard biopolymers (163 molecules)
1
100
2-acetamido-2-deoxy-beta-D-glucopyranose
2
25
beta-D-mannopyranose
3
37
alpha-D-mannopyranose
4
1
alpha-L-fucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303