5WT9: Complex structure of PD-1 and nivolumab-Fab

PDB ID: 5WT9Download
MMDB ID: 147428
PDB Deposition Date: 2016/12/10
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.401  Å
Source Organism:
Similar Structures:
Biological Unit for 5WT9: trimeric; determined by author and by software (PISA)
Molecular Components in 5WT9
Label Count Molecule
Proteins (3 molecules)
1
Heavy Chain of Nivolumab
Molecule annotation
1
Light Chain of Nivolumab
Molecule annotation
1
Programmed Cell Death Protein 1
(Gene symbol: PDCD1)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
alpha-L-fucopyranosealpha-L-fucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303