6D64: Crystal Structure of Human CD1b in Complex with POPC

PDB ID: 6D64Download
MMDB ID: 170462
PDB Deposition Date: 2018/4/20
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.7  Å
Source Organism:
Similar Structures:
Biological Unit for 6D64: dimeric; determined by software (PISA)
Molecular Components in 6D64
Label Count Molecule
Proteins (2 molecules)
1
T-cell Surface Glycoprotein Cd1b
(Gene symbol: CD1B)
Molecule annotation
1
Beta-2-microglobulin
(Gene symbol: B2M)
Molecule annotation
Chemicals and Non-standard biopolymers (31 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
4
alpha-D-mannopyranosealpha-D-mannopyranose
4
4
alpha-L-fucopyranosealpha-L-fucopyranose
5
1
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate
6
1
tetracosyl octadecanoatetetracosyl octadecanoate
7
7
CHLORIDE IONCHLORIDE ION
8
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
9
1
SODIUM IONSODIUM ION
10
2
IODIDE IONIODIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303