6DRD: RNA Pol II(G)

PDB ID: 6DRDDownload
MMDB ID: 176016
PDB Deposition Date: 2018/6/11
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 3.9  Å
Source Organism:
Similar Structures:
Biological Unit for 6DRD: tridecameric; determined by author
Molecular Components in 6DRD
Label Count Molecule
Proteins (13 molecules)
1
DNA-directed RNA Polymerase II Subunit Rpb1
(Gene symbol: POLR2A)
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb2
(Gene symbol: POLR2B)
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb3
(Gene symbol: POLR2C)
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb4
(Gene symbol: POLR2D)
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc1
(Gene symbol: POLR2E)
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc2
(Gene symbol: POLR2F)
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb7
(Gene symbol: POLR2G)
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc3
(Gene symbol: POLR2H)
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb9
(Gene symbol: POLR2I)
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc5
(Gene symbol: POLR2L)
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb11-a
(Gene symbol: POLR2J)
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc4
(Gene symbol: POLR2K)
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Grinl1a
(Gene symbol: POLR2M)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
5
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303