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6F8X:
Crystal structure of the PDE4D catalytic domain in complex with GEBR-26g
PDB ID:
6F8X
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MMDB ID:
162179
PDB Deposition Date:
2017/12/13
Updated in MMDB:
2018/05
Experimental Method:
x-ray diffraction
Resolution:
1.95 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6F8X: dimeric; determined by author and by software (PISA)
Molecular Components in 6F8X
Label
Count
Molecule
Proteins (2 molecules)
A
B
2
Camp-specific 3',5'-cyclic Phosphodiesterase 4D
(Gene symbol:
PDE4D
)
Chemicals and Non-standard biopolymers (11 molecules)
1
2
ZINC ION
2
4
MAGNESIUM ION
3
2
2-[(5~{R})-3-(3-cyclopentyloxy-4-methoxy-phenyl)-4,5-dihydro-1,2-oxazol-5-yl]-~{N},~{N}-bis(2-hydroxyethyl)ethanamide
4
2
1,2-ETHANEDIOL
5
1
DIMETHYL SULFOXIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303