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6GIQ:
Saccharomyces cerevisiae respiratory supercomplex III2IV
PDB ID:
6GIQ
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MMDB ID:
170204
PDB Deposition Date:
2018/5/15
Updated in MMDB:
2019/12
Experimental Method:
electron microscopy
Resolution:
3.23 Å
Source Organism:
Saccharomyces cerevisiae W303
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6GIQ: 32-meric; determined by author and by software (PISA)
Molecular Components in 6GIQ
Label
Count
Molecule
Proteins (32 molecules)
A
L
2
Cytochrome B-c1 Complex Subunit 1, Mitochondrial
(Gene symbol:
COR1
)
B
M
2
Cytochrome B-c1 Complex Subunit 2, Mitochondrial
(Gene symbol:
QCR2
)
C
N
2
Cytochrome B
(Gene symbol:
COB
)
D
O
2
Cytochrome C1, Heme Protein, Mitochondrial
(Gene symbol:
CYT1
)
E
P
2
Cytochrome B-c1 Complex Subunit Rieske, Mitochondrial
(Gene symbol:
RIP1
)
F
Q
2
Cytochrome B-c1 Complex Subunit 6
(Gene symbol:
QCR6
)
G
R
2
Cytochrome B-c1 Complex Subunit 7
(Gene symbol:
QCR7
)
H
S
2
Cytochrome B-c1 Complex Subunit 8
(Gene symbol:
QCR8
)
I
T
2
Cytochrome B-c1 Complex Subunit 9
(Gene symbol:
QCR9
)
U
V
2
Cytochrome B-c1 Complex Subunit 10
(Gene symbol:
QCR10
)
a
1
Cytochrome C Oxidase Subunit 1
(Gene symbol:
COX1
)
b
1
Cytochrome C Oxidase Subunit 2
(Gene symbol:
COX2
)
c
1
Cytochrome C Oxidase Subunit 3
(Gene symbol:
COX3
)
d
1
Cytochrome C Oxidase Subunit 4, Mitochondrial
(Gene symbol:
COX4
)
e
1
Cytochrome C Oxidase Polypeptide 5A, Mitochondrial
(Gene symbol:
COX5A
)
f
1
Cytochrome C Oxidase Subunit 6, Mitochondrial
(Gene symbol:
COX6
)
g
1
Cytochrome C Oxidase Subunit 7
(Gene symbol:
COX7
)
h
1
Cytochrome C Oxidase Polypeptide Viii, Mitochondrial
(Gene symbol:
COX8
)
i
1
Cytochrome C Oxidase Subunit 7A
(Gene symbol:
COX9
)
j
1
Cytochrome C Oxidase Subunit 6B
(Gene symbol:
COX12
)
k
1
Cytochrome C Oxidase Subunit 6A, Mitochondrial
(Gene symbol:
COX13
)
m
1
Unknown COX Subunit
Chemicals and Non-standard biopolymers (26 molecules)
1
2
(1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate
(Link to PubChem not yet available)
2
6
PROTOPORPHYRIN IX CONTAINING FE
(Link to PubChem not yet available)
3
2
(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate
(Link to PubChem not yet available)
4
1
(5S,11R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate
(Link to PubChem not yet available)
5
2
5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL
(Link to PubChem not yet available)
6
2
(1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate
(Link to PubChem not yet available)
7
2
FE2/S2 (INORGANIC) CLUSTER
(Link to PubChem not yet available)
8
2
1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
(Link to PubChem not yet available)
9
2
(1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate
(Link to PubChem not yet available)
10
1
(2R,5S,11R,14R)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate
(Link to PubChem not yet available)
11
1
COPPER (II) ION
(Link to PubChem not yet available)
12
2
HEME-A
(Link to PubChem not yet available)
13
1
DINUCLEAR COPPER ION
(Link to PubChem not yet available)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303