6VYP: Crystal structure of the LSD1/CoREST histone demethylase bound to its nucleosome substrate

PDB ID: 6VYPDownload
MMDB ID: 188047
PDB Deposition Date: 2020/2/27
Updated in MMDB: 2022/11
Experimental Method:
x-ray diffraction
Resolution: 4.99  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6VYP: 14-meric; determined by author
Molecular Components in 6VYP
Label Count Molecule
Proteins (12 molecules)
2
Histone H3
Molecule annotation
2
Histone H4
Molecule annotation
2
Histone H2A Type 1
Molecule annotation
2
Histone H2B 1.1
Molecule annotation
2
Lysine-specific Histone Demethylase 1A
Molecule annotation
2
Rest Corepressor 1
Molecule annotation
Nucleotides(2 molecules)
1
DNA (191-mer)
Molecule annotation
1
DNA (191-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
FLAVIN-ADENINE DINUCLEOTIDEFLAVIN-ADENINE DINUCLEOTIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303