6XU0: Archaeoglobus fulgidus Argonaute protein with DNA oligoduplex 5'-pATCGTGGCCACGAT

PDB ID: 6XU0Download
MMDB ID: 197964
PDB Deposition Date: 2020/1/17
Updated in MMDB: 2024/01
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Archaeoglobus fulgidus▼
Similar Structures:
Biological Unit for 6XU0: hexameric; determined by author and by software (PISA)
Molecular Components in 6XU0
Label Count Molecule
Proteins (2 molecules)
2
Piwi Protein
Molecule annotation
Nucleotides(4 molecules)
4
5'-d(*ap*tp*cp*gp*tp*gp*gp*cp*cp*ap*cp*gp*ap*tp)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
3
CACODYLATE IONCACODYLATE ION
3
2
BETA-MERCAPTOETHANOLBETA-MERCAPTOETHANOL
4
2
GLYCEROLGLYCEROL
5
1
2-(2-METHOXYETHOXY)ETHANOL2-(2-METHOXYETHOXY)ETHANOL
6
1
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303