6ZFU: Crystal structure of bovine cytochrome bc1 in complex with quinolone inhibitor RKA066

PDB ID: 6ZFUDownload
MMDB ID: 203671
PDB Deposition Date: 2020/6/17
Updated in MMDB: 2021/07
Experimental Method:
x-ray diffraction
Resolution: 3.5  Å
Source Organism:
Similar Structures:
Biological Unit for 6ZFU: decameric; determined by author and by software (PISA)
Molecular Components in 6ZFU
Label Count Molecule
Proteins (10 molecules)
1
Cytochrome B-c1 Complex Subunit 1, Mitochondrial
Molecule annotation
1
Cytochrome B-c1 Complex Subunit 2, Mitochondrial
Molecule annotation
1
Cytochrome B
Molecule annotation
1
Cytochrome C1, Heme Protein, Mitochondrial
Molecule annotation
1
Cytochrome B-c1 Complex Subunit Rieske, Mitochondrial
Molecule annotation
1
Cytochrome B-c1 Complex Subunit 7
Molecule annotation
1
Cytochrome B-c1 Complex Subunit 8
Molecule annotation
1
Cytochrome B-c1 Complex Subunit 6, Mitochondrial
Molecule annotation
1
Cytochrome B-c1 Complex Subunit Rieske, Mitochondrial
Molecule annotation
1
Cytochrome B-c1 Complex Subunit 9
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
1
3
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
2
1
1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
3
4
CARDIOLIPINCARDIOLIPIN
4
2
PROTOPORPHYRIN IX CONTAINING FEPROTOPORPHYRIN IX CONTAINING FE
5
1
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
6
2
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
7
1
3-methyl-1-oxidanyl-2-[4-[[4-(trifluoromethyloxy)phenyl]methyl]phenyl]quinolin-4-one3-methyl-1-oxidanyl-2-[4-[[4-(trifluoromethyloxy)phenyl]methyl]phenyl]quinolin-4-one
8
1
HEME CHEME C
9
5
PHOSPHATE IONPHOSPHATE ION
10
1
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
11
1
1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303