7ZSA: Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP (complex B)

PDB ID: 7ZSADownload
MMDB ID: 223199
PDB Deposition Date: 2022/5/6
Updated in MMDB: 2022/12
Experimental Method:
electron microscopy
Resolution: 4  Å
Source Organism:
synthetic construct
Similar Structures:
Biological Unit for 7ZSA: 38-meric; determined by author
Molecular Components in 7ZSA
Label Count Molecule
Proteins (36 molecules)
1
DNA-directed RNA Polymerase II Subunit Rpb1
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb2
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb3
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb4
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc1
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc2
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb7
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc3
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb9
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc5
Molecule annotation
1
DNA-directed RNA Polymerase II Subunit Rpb11
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc4
Molecule annotation
1
Transcription Initiation Factor IIB
Molecule annotation
1
Tata-box-binding Protein
Molecule annotation
1
Transcription Initiation Factor IIF Subunit Alpha
Molecule annotation
1
Transcription Initiation Factor IIF Subunit Beta
Molecule annotation
1
Transcription Initiation Factor IIA Large Subunit
Molecule annotation
1
Transcription Initiation Factor IIA Subunit 2
Molecule annotation
1
Transcription Initiation Factor IIE Subunit Alpha
Molecule annotation
1
Transcription Initiation Factor IIE Subunit Beta
Molecule annotation
1
General Transcription and DNA Repair Factor IIH Helicase Subunit XPD
Molecule annotation
1
General Transcription and DNA Repair Factor IIH Subunit Tfb1
Molecule annotation
1
General Transcription and DNA Repair Factor IIH Subunit Tfb2
Molecule annotation
1
RNA Polymerase II Transcription Factor B Subunit 3
Molecule annotation
1
General Transcription and DNA Repair Factor IIH Subunit Tfb4
Molecule annotation
1
General Transcription and DNA Repair Factor IIH Subunit Tfb5
Molecule annotation
1
General Transcription and DNA Repair Factor IIH Subunit Ssl1
Molecule annotation
1
General Transcription and DNA Repair Factor IIH Helicase Subunit XPB
Molecule annotation
2
Histone H3.2
Molecule annotation
2
Histone H4
Molecule annotation
2
Histone H2A
Molecule annotation
2
Histone H2B 1.1
Molecule annotation
Nucleotides(2 molecules)
1
Non-template DNA (209-mer)
Molecule annotation
1
Template DNA (209-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (19 molecules)
17
ZINC ION (Link to PubChem not yet available)ZINC ION
1
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
1
IRON/SULFUR CLUSTER (Link to PubChem not yet available)IRON/SULFUR CLUSTER
* Click molecule labels to explore molecular sequence information.

Citing MMDB