National Center for
Biotechnology Information

8UKS: RNA polymerase II elongation complex with Fapy-dG lesion soaking with CTP before chemistry

PDB ID:

MMDB ID:

245926

PDB Deposition Date:

2023/10/15

Updated in MMDB:

2024/10

Experimental Method:

x-ray diffraction

Resolution:

3.4 Å

Source Organism:

Saccharomyces cerevisiae S288C▼

Taxonomy	Molecule
Saccharomyces cerevisiae S288C	A, B, C, E, F, H, I, J, K, L
synthetic construct	R, T, N

Similar Structures:

Biological Unit for 8UKS: tridecameric; determined by author

Molecular Components in 8UKS
Label	Count	Molecule
Proteins (10 molecules)
A	1	DNA-directed RNA Polymerase II Subunit Rpb1
B	1	DNA-directed RNA Polymerase II Subunit Rpb2
C	1	DNA-directed RNA Polymerase II Subunit Rpb3
E	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc1
F	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc2
H	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc3
I	1	DNA-directed RNA Polymerase II Subunit Rpb9
J	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc5
K	1	DNA-directed RNA Polymerase II Subunit Rpb11
L	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc4
Nucleotides(3 molecules)
R	1	RNA
T	1	Tsdna With Fapy-dg Lesion
N	1	Ntsdna
Chemicals and Non-standard biopolymers (11 molecules)
1	2	MAGNESIUM ION
2	8	ZINC ION
3	1	CYTIDINE-5'-TRIPHOSPHATE

* Click molecule labels to explore molecular sequence information.

Citing MMDB