8XAY: Cryo-EM structure of an anti-phage defense complex bound to ATPrS and DNA

PDB ID: 8XAYDownload
MMDB ID: 247977
PDB Deposition Date: 2023/12/5
Updated in MMDB: 2024/08
Experimental Method:
electron microscopy
Resolution: 2.81  Å
Source Organism:
Similar Structures:
Biological Unit for 8XAY: eicosameric; determined by author and by software
Molecular Components in 8XAY
Label Count Molecule
Proteins (18 molecules)
6
Atp-binding Protein
Molecule annotation
12
Duf4297
Molecule annotation
Nucleotides(2 molecules)
1
S20dna3
Molecule annotation
1
S20dna4
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
4
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTERPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
2
6
MAGNESIUM IONMAGNESIUM ION
3
2
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303