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Taxonomy browser (Escherichia coli HS)

Escherichia coli HS

Taxonomy ID: 331112 (for references in articles please use NCBI:txid331112)
current name
Escherichia coli HS
equivalent:
Escherichia coli str. HS
Escherichia coli strain HS
NCBI BLAST name: enterobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Host: bacteria|vertebrates
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
   Entrez records   
Database name Direct links
Nucleotide 94
Protein 5,637
Structure 4
Genome 1
GEO Datasets 20
PubMed Central 10
Gene 4,637
SRA Experiments 48
Identical Protein Groups 4,795
BioProject 7
BioSample 29
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Rasko DA et al. (2008)
Rasko, D.A., Rosovitz, M.J., Myers, G.S., Mongodin, E.F., Fricke, W.F., Gajer, P., Crabtree, J., Sperandio, V., and Ravel, J. "The pan-genome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates." J. Bacteriol. (2008) 190:6881-6893.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD: Go0000062 organism-specific Genomes On Line Database
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
640753025: Escherichia coli sv. O9 HS organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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