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ASM101436v1

Organism name:
Drosophila miranda (flies)
Isolate:
BV_Dmiranda
Sex:
pooled male and female
BioSample:
SAMN03277610
BioProject:
PRJNA268391
Submitter:
UC Berkeley
Date:
2015/05/28
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001014365.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JXPA01
Assembly method:
SOAPdenovo v. 1.05
Expected final version:
no
Genome coverage:
13.9x
Sequencing technology:
Illumina

IDs: 343361 [UID] 1788158 [GenBank]

See Genome Information for Drosophila miranda

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length131,486,098
Total ungapped length129,920,342
Gaps between scaffolds0
Number of scaffolds11,927
Scaffold N5050,131
Scaffold L50675
Number of contigs31,930
Contig N5012,439
Contig L502,333
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)11,927

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced131,486,09811,927129,920,34250,13120,0030