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Kyuss_2.0

Organism name:
Lolium perenne (perennial ryegrass)
Isolate:
Kyuss_39
BioSample:
SAMN17257337
BioProject:
PRJNA1045569
Submitter:
Molecular Plant Breeding Group, ETH Zurich
Date:
2024/03/25
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_019359855.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAEVFB02
Assembly method:
NextDenovo v. 2.5.2
Expected final version:
no
Genome coverage:
30.0x
Sequencing technology:
Oxford Nanopore PromethION

IDs: 22095071 [UID] 55507498 [GenBank]

See Genome Information for Lolium perenne

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,264,761,315
Total ungapped length2,264,755,215
Gaps between scaffolds0
Number of scaffolds104
Scaffold N50333,278,994
Scaffold L504
Number of contigs165
Contig N50118,861,474
Contig L507
Total number of chromosomes and plasmids7
Number of component sequences (WGS or clone)104

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_019359865.2)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM033332.2n/an/a0
Chromosome 2CM033333.2n/an/a0
Chromosome 3CM033334.2n/an/a0
Chromosome 4CM033335.2n/an/a0
Chromosome 5CM033336.2n/an/a0
Chromosome 6CM033337.2n/an/a0
Chromosome 7CM033338.2n/an/a0
unplacedn/an/an/a97

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All2,264,761,3151042,264,755,215333,278,994610
Chromosome 1271,869,6321271,869,032271,869,63260
Chromosome 2333,278,9941333,277,894333,278,994110
Chromosome 3354,057,9471354,057,647354,057,94730
Chromosome 4406,068,4501406,067,950406,068,45050
Chromosome 5267,972,0091267,970,409267,972,009160
Chromosome 6274,013,5021274,012,602274,013,50290
Chromosome 7334,192,8431334,191,943334,192,84390
unplaced23,307,9389723,307,738395,30220