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iqSchGreg1.1 alternate haplotype

Organism name:
Schistocerca gregaria (desert locust)
Isolate:
iqSchGreg1
Sex:
male
BioSample:
SAMN23383904
BioProject:
PRJNA797116
Submitter:
United States Department of Agriculture
Date:
2022/06/23
Assembly type:
alternate-pseudohaplotype
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_023898265.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAKZLT01
Assembly method:
HiFiASM v. 0.13-r308
Expected final version:
yes
Genome coverage:
41x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_023897955.2 (principal pseudohaplotype of diploid)

IDs: 13059421 [UID] 34108708 [GenBank]

See Genome Information for Schistocerca gregaria

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length7,821,340,977
Total ungapped length7,821,340,841
Gaps between scaffolds0
Number of scaffolds31,470
Scaffold N501,734,766
Scaffold L501,256
Number of contigs31,473
Contig N501,734,766
Contig L501,256
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)31,470

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,821,340,97731,4707,821,340,8411,734,76630