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ASM2977503v1

Organism name:
Drosophila simulans (flies)
Isolate:
dsim_25_M0
Sex:
male
BioSample:
SAMN33508903
BioProject:
PRJNA939765
Submitter:
Univeristy of Edinburgh
Date:
2023/04/17
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_029775035.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
CLC NGS Cell v. 1.0
Expected final version:
no
Reference guided assembly:
GCF_016746395.2_Prin_Dsim_3.1
Genome coverage:
30x
Sequencing technology:
Illumina HiSeq

IDs: 16449951 [UID] 42177188 [GenBank]

See Genome Information for Drosophila simulans

There are 48 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length120,905,797
Total ungapped length120,903,706
Gaps between scaffolds0
Number of scaffolds6
Scaffold N5023,399,903
Scaffold L503
Number of contigs9
Contig N5022,319,025
Contig L503
Total number of chromosomes and plasmids6
Number of component sequences (WGS or clone)6

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_029775045.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 2LCP122193.1n/an/a
Chromosome 2RCP122194.1n/an/a
Chromosome 3LCP122195.1n/an/a
Chromosome 3RCP122196.1n/an/a
Chromosome 4CP122197.1n/an/a
Chromosome XCP122198.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All120,905,7976120,903,70623,399,90330
Chromosome 2L23,857,595123,857,09623,857,59510
Chromosome 2R22,319,025122,319,02522,319,02500
Chromosome 3L23,399,903123,399,90323,399,90300
Chromosome 3R28,149,585128,149,58528,149,58500
Chromosome 41,146,86711,146,8671,146,86700
Chromosome X22,032,822122,031,23022,032,82220