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AE-03may19-312

Organism name:
Pirellula staleyi DSM 6068 (bacteria)
Taxonomy check:
Inconclusive
Isolate:
AE-03may19-312
BioSample:
SAMEA110379244
BioProject:
PRJEB35640
Submitter:
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
Date:
2022/09/09
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
GenBank assembly accession:
GCA_945861035.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CAMASR01
Genome coverage:
10x

IDs: 13733621 [UID] 35756508 [GenBank]

See Genome Information for Pirellula staleyi

Pathogen Detection Resources

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length4,006,703
Total ungapped length4,006,703
Number of contigs286
Contig N5020,010
Contig L5062
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)286

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced4,006,7032864,006,70320,01000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Pirellula staleyi DSM 6068Pirellula staleyi

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000025185.1Pirellula staleyi DSM 6068suspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_007860185.1Novipirellula aureliaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type84.460.040.02
Best-match type99.330.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena