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Source database (GenBank or RefSeq) File type

ASM17249v1

Organism name:: Anaplasma marginale str. Puerto Rico (a-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: Puerto Rico
BioSample:: SAMN02436659
BioProject:: PRJNA29207
Submitter:: Washington State University
Date:: 2009/01/30
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000172495.1 (latest)
RefSeq assembly accession:: GCF_000172495.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: ABOQ01
Assembly method:: Unknown v. 2008
Genome coverage:: Unknown
Sequencing technology:: 454

IDs: 213278 [UID] 213258 [GenBank] 213278 [RefSeq]

See Genome Information for Anaplasma marginale

Pathogen Detection Resources

There are 24 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000172495.1	=	GCF_000172495.1	ASM17249v1	Contig	Latest GenBank, Latest RefSeq

Comment

The Puerto Rico strain was isolated from cattle in Puerto Rico in 1985 and has been passaged multiple times in cattle since isolation. It is virulent and transmissible by Dermacentor andersoni ticks.
Sequencing technology: 454

Global statistics

Total sequence length	1,158,530
Total ungapped length	1,158,530
Number of contigs	59
Contig N50	35,461
Contig L50	10
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	59

	ANI	Query coverage	Subject coverage
Declared type	99.68	96.70	98.53
Best-match type	99.68	96.70	98.53

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ASM17249v1

See Genome Information for Anaplasma marginale

Pathogen Detection Resources

There are 24 assemblies for this organism

History (Show revision history)

Comment

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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