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ASM1862321v1

Organism name:
Flexistipes sinusarabici (bacteria)
Taxonomy check:
OK
Isolate:
KhW_metabat.31
BioSample:
SAMN14400451
BioProject:
PRJNA575141
Submitter:
University of Tehran
Date:
2021/06/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
GenBank assembly accession:
GCA_018623215.1 (latest)
RefSeq assembly accession:
GCF_018623215.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAAZVV01
Assembly method:
Megahit v. 1.1.4
Expected final version:
no
Genome coverage:
10x
Sequencing technology:
Illumina NovaSeq

IDs: 10175871 [UID] 27088078 [GenBank] 40763438 [RefSeq]

See Genome Information for Flexistipes sinusarabici

Pathogen Detection Resources

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,138,750
Total ungapped length2,138,750
Number of contigs190
Contig N5016,954
Contig L5040
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)190

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,138,7501902,138,75016,95400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Flexistipes sinusarabiciFlexistipes sinusarabici

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000218625.1Flexistipes sinusarabici DSM 4947suspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000218625.1Flexistipes sinusarabicisuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.8684.5571.56
Best-match type97.8684.5571.56

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna