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Smik-IFO1815

Organism name:
Saccharomyces mikatae IFO 1815 (budding yeasts)
Infraspecific name:
Strain: IFO1815
BioSample:
SAMEA111517679
BioProject:
PRJEB57075
Submitter:
UNIVERSITY COLLEGE DUBLIN
Date:
2022/11/01
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_947241705.1 (latest)
RefSeq assembly accession:
GCF_947241705.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
HGAP v3.0
Genome coverage:
100x
Sequencing technology:
PacBio

IDs: 15480821 [UID] 39806988 [GenBank] 42780868 [RefSeq]

See Genome Information for Saccharomyces mikatae

Pathogen Detection Resources

There are 7 assemblies for this organism

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History (Show revision history)

Comment

Genome assembly of Saccharomyces mikatae strain IFO 1815

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::INSDC submitter
Annotation Status::Full annotation
Annotation Pipeline::Eukaryotic Annotation Propagation Pipeline
##Genome-Annotation-Data-END##

Global statistics

Total sequence length12,104,871
Total ungapped length12,104,871
Total number of chromosomes and plasmids16

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_947241704.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1OX365757.1=NC_079256.1
Chromosome 2OX365758.1=NC_079257.1
Chromosome 3OX365759.1=NC_079258.1
Chromosome 4OX365760.1=NC_079259.1
Chromosome 5OX365761.1=NC_079260.1
Chromosome 6OX365762.1=NC_079261.1
Chromosome 7OX365763.1=NC_079262.1
Chromosome 8OX365764.1=NC_079263.1
Chromosome 9OX365765.1=NC_079264.1
Chromosome 10OX365766.1=NC_079265.1
Chromosome 11OX365767.1=NC_079266.1
Chromosome 12OX365768.1=NC_079267.1
Chromosome 13OX365769.1=NC_079268.1
Chromosome 14OX365770.1=NC_079269.1
Chromosome 15OX365771.1=NC_079270.1
Chromosome 16OX365772.1=NC_079271.1

Assembly statistics

MoleculeTotal
Length
All12,104,871
Chromosome 1248,052
Chromosome 2811,203
Chromosome 3322,525
Chromosome 41,495,645
Chromosome 5599,206
Chromosome 6848,074
Chromosome 7663,440
Chromosome 8542,523
Chromosome 9462,568
Chromosome 10734,496
Chromosome 11687,171
Chromosome 121,104,771
Chromosome 13932,466
Chromosome 14753,128
Chromosome 151,095,438
Chromosome 16804,165