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Accession: PRJNA1000951 ID: 1000951

EcoToxChip 2016 LSARP RNASeq database

As part of the EcoToxChip project, 49 distinct exposure studies were conducted on three lab model species (Japanese quail, fathead minnow, African clawed frog) and three ecologically relevant species (double crested cormorant, rainbow trout, northern leopard frog), at multiple life stages (embryo, adult), exposed to eight chemicals of environmental concern (ethinyl estradiol-EE2, hexabromocyclododecane-HBCD, lead-Pb, selenomethionine-SeMe, 17β trenbolone-TB, chlorpyrifos-CPF, fluoxetine-FLX, and benzo [a] pyrene-BaP. More...
AccessionPRJNA1000951; GEO: GSE239776
Data TypeTranscriptome or Gene expression
ScopeMultispecies
PublicationsMittal K et al., "Comparing Transcriptomic Responses to Chemicals Across Six Species Using the EcoToxChip RNASeq Database.", Environ Toxicol Chem, 2023 Dec 12;
SubmissionRegistration date: 1-Aug-2023
McGill University
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments724
Publications
PubMed1
Other datasets
BioSample724
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes24
SRA Data Details
ParameterValue
Data volume, Gbases4,482
Data volume, Tbytes1.49

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