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Accession: PRJNA1006702 ID: 1006702

Molecular epidemiology of carbapenem-resistant Gram negative pathogens from Chile

The aim of this project is to characterise the molecular features (resistome, epidemiology, virulome, and others) of carbapenem-resistant Gram negative isolates collected in Chile.
AccessionPRJNA1006702
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "CHARACTERIZATION AND DISSEMINATION DYNAMICS OF CARBAPENEMASES IN CLINICALLY-RELEVANT NON-FERMENTING GRAM-NEGATIVE BACILLI" (Grant ID 11190602, The National Fund for Scientific and Technological Development)
  • "Molecular Characterization Of Carbapenem-producing Pseudomonas Aeruginosa Isolated From Chilean hospitals" (Grant ID 60370625, Pfizer)
SubmissionRegistration date: 18-Aug-2023
Universidad de Concepcion
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)39
WGS master34
Genomic DNA5
Protein Sequences4160
Other datasets
BioSample35
Assembly35
Assembly details:
Assembly levelNumber of Assemblies
1
34
35
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_031326185.1Complete genomeSAMN34266403
UCO-553
GCA_030913445.1ContigJAVFCE000000000
SAMN37046639
Psa-75
GCA_030913415.1ContigJAVFDG000000000
SAMN37046611
P-355
GCA_030913405.1ContigJAVFDF000000000
SAMN37046612
P-358
GCA_030865205.1ContigJAVFCS000000000
SAMN37046625
P-493
GCA_030865125.1ContigJAVFDI000000000
SAMN37046609
P-345
GCA_030865135.1ContigJAVFCR000000000
SAMN37046626
P-511
GCA_030865165.1ContigJAVFCC000000000
SAMN37046641
Psa-108
GCA_030865145.1ContigJAVFCM000000000
SAMN37046631
P-549
GCA_030865265.1ContigJAVFDD000000000
SAMN37046614
P-366
GCA_030865255.1ContigJAVFCT000000000
SAMN37046624
P-485
GCA_030865245.1ContigJAVFCY000000000
SAMN37046619
P-463
GCA_030865225.1ContigJAVFCX000000000
SAMN37046620
P-469
GCA_030865365.1ContigJAVFDA000000000
SAMN37046617
P-389
GCA_030865355.1ContigJAVFDC000000000
SAMN37046615
P-370
GCA_030865345.1ContigJAVFDE000000000
SAMN37046613
P-362
GCA_030865325.1ContigJAVFDJ000000000
SAMN37046608
P-340
GCA_030865305.1ContigJAVFCZ000000000
SAMN37046618
P-461
GCA_030865435.1ContigJAVFCV000000000
SAMN37046622
P-477
GCA_030865605.1ContigJAVFCW000000000
SAMN37046621
P-474
GCA_030865625.1ContigJAVFCP000000000
SAMN37046628
P-539
GCA_030865565.1ContigJAVFCN000000000
SAMN37046630
P-545
GCA_030865575.1ContigJAVFCK000000000
SAMN37046633
P-671
GCA_030865535.1ContigJAVFCL000000000
SAMN37046632
P-653
GCA_030865525.1ContigJAVFCI000000000
SAMN37046635
P-697
GCA_030865505.1ContigJAVFCJ000000000
SAMN37046634
P-673
GCA_030865485.1ContigJAVFCF000000000
SAMN37046638
Psa-74
GCA_030865465.1ContigJAVFCH000000000
SAMN37046636
UCO-534
GCA_030865725.1ContigJAVFCG000000000
SAMN37046637
UCO-549
GCA_030865675.1ContigJAVFDB000000000
SAMN37046616
P-372
GCA_030865665.1ContigJAVFCQ000000000
SAMN37046627
P-512
GCA_030865655.1ContigJAVFCD000000000
SAMN37046640
Psa-76
GCA_030865645.1ContigJAVFCU000000000
SAMN37046623
P-481
GCA_030865745.1ContigJAVFCO000000000
SAMN37046629
P-542
GCA_030867485.1ContigJAVFDH000000000
SAMN37046610
P-344

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