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28 additional projects are components of the Ocean Genomes (Minderoo OceanOmics Centre at University of the Western Australia).
The Red Emperor (Lutjanus sebae) is found throughout the Indo-Pacific region. This assembly was produced by Ocean Genomes. The assembly is based on PacBio HiFi long reads, Dovetail Omni-C libraries and Illumina short reads. Data was generated at the Minderoo OceanOmics Centre at the University of Western Australia and assembled in house using a custom pipeline (https://github.com/Computational-Biology-OceanOmics) that follows Vertebrate Genomes Project workflows (https://vertebrategenomesproject.org/). The raw data and version 1 assembly are made available and should be credited in accordance with Ocean Genomes data use and sharing policies URL: https://www.minderoo.org/oceanomics. To discuss interim access, please contact oceangenomes@uwa.edu.au.
| Accession | PRJNA1077316 |
| Type | Umbrella project |
| Organism | Lutjanus sebae[Taxonomy ID: 232192] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Lutjaniformes; Lutjanidae; Lutjanus; Lutjanus sebae |
| Submission | Registration date: 16-Feb-2024
Minderoo OceanOmics Centre at the University of Western Australia |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : No data links |
3
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BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA1101483 | No data links | Lutjanus sebae | Lutjanus sebae (Red Emperor) genome, fLutSeb1, haplotype 1 (Minderoo OceanOmics Centre...) | | PRJNA1101484 | No data links | Lutjanus sebae | Lutjanus sebae (Red Emperor) genome, fLutSeb1, haplotype 2 (Minderoo OceanOmics Centre...) | | PRJNA1107546 | No data links | Lutjanus sebae | Lutjanus sebae (Red Emperor),fLutSeb1, sequence data (Minderoo OceanOmics Centre...) |
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