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Accession: PRJNA1089650 ID: 1089650

Chromatin and gene expression profile at single nuclei level of CD45+ leukocytes from the rhesus brain parenchyma (Rhesus monkey)

See Genome Information for Macaca mulatta
We used Chromium Single Cell Multiome ATAC + Gene Expression to analyze CD45+ leukocytes in the rhesus macaque brain during homeostasis and chronic SIV infection Overall design: Leukocytes (CD45+ cells) of previously cryopreserved rhesus macaque brain single cell suspensions were isolated using MACS CD45 microbeads/column purification followed by Fluorescence-activated cell sorting (FACS) according to the presence of absence of CD45 signal. Nuclei were extracted according to 10x protocols and analyzed using single snATACseq
AccessionPRJNA1089650; GEO: GSE261968
ScopeMultiisolate
OrganismMacaca mulatta[Taxonomy ID: 9544]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta
SubmissionRegistration date: 19-Mar-2024
Iyer Lab, Immunology, University of California Davis
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2652
SRA Data Details
ParameterValue
Data volume, Gbases103
Data volume, Mbytes26198

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