See
Genome Information for Amazona ochrocephala
Navigate Up
Navigate Across
The yellow-crowned parrot (Amazona ochrocephala) is a species of parrot native to tropical South America, Panama and Trinidad and Tobago in the Caribbean. It is a bird of tropical forests (both humid and dry), woodlands, mangroves, and savannas and may also be found on cultivated land and suburban areas (from Wikipedia entry). This sample of a female individual rescued in Yarumal, Antioquia, Colombia by the organization Corantioquia was procured by Paola Pulido-Santacruz to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.
| Accession | PRJNA1103237 |
| Type | Umbrella project |
| Organism | Amazona ochrocephala[Taxonomy ID: 151761] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Amazona; Amazona ochrocephala |
| Submission | Registration date: 22-Apr-2024
Vertebrate Genomes Project |
| Relevance | Reference Genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 67 |
| WGS master | 2 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes |
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA1102367 | Chromosomes | Amazona ochrocephala | Amazona ochrocephala (yellow-crowned parrot) genome, bAmaOch1, haplotype 1 (Vertebrate Genomes Project) | | PRJNA1102368 | Chromosomes | Amazona ochrocephala | Amazona ochrocephala (yellow-crowned parrot) genome, bAmaOch1, haplotype 2 (Vertebrate Genomes Project) |
|