ID 1104983 - BioProject

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Accession: PRJNA1104983 ID: 1104983

Genomic epidemiology of carbapenem-resistant Pseudomonas aeruginosa in the northeastern regions of South Africa

Carbapenem-resistant Pseudomonas aeruginosa (CRPA) is a global health concern as it escapes the effects of antibiotics through multiple intrinsic and acquired antibiotic resistance mechanisms. More...

Accession	PRJNA1104983
Data Type	Genome sequencing
Scope	Multispecies
Submission	Registration date: 26-Apr-2024 University of Pretoria
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	79
Other datasets
BioSample	79
Assembly	79

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

37
42
79

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_040743245.1	JBFKZM000000000	SAMN41088412	PA-A16	Pseudomonas aeruginosa
GCA_039630025.1	JBCLWL000000000	SAMN41088439	PA-D26	Pseudomonas aeruginosa
GCA_039414035.1	JBCIYG000000000	SAMN41088418	PA-A24	Pseudomonas aeruginosa
GCA_039414015.1	JBCIYE000000000	SAMN41088420	PA-A4	Pseudomonas aeruginosa
GCA_039413995.1	JBCIYF000000000	SAMN41088419	PA-A26	Pseudomonas aeruginosa
GCA_039413975.1	JBCIYD000000000	SAMN41088421	PA-A5	Pseudomonas aeruginosa
GCA_039413955.1	JBCIYC000000000	SAMN41088422	PA-A7	Pseudomonas aeruginosa
GCA_039413935.1	JBCIYB000000000	SAMN41088423	PA-A8	Pseudomonas aeruginosa
GCA_039413915.1	JBCIYA000000000	SAMN41088424	PA-A9-1	Pseudomonas aeruginosa
GCA_039413895.1	JBCIXY000000000	SAMN41088426	PA-D10	Pseudomonas aeruginosa
GCA_039413875.1	JBCIXZ000000000	SAMN41088425	PA-A9-2	Pseudomonas aeruginosa
GCA_039413855.1	JBCIXX000000000	SAMN41088427	PA-D11	Pseudomonas aeruginosa
GCA_039413835.1	JBCIXW000000000	SAMN41088428	PA-D12	Pseudomonas aeruginosa
GCA_039413815.1	JBCIXV000000000	SAMN41088429	PA-D15	Pseudomonas aeruginosa
GCA_039413775.1	JBCIXU000000000	SAMN41088430	PA-D16	Pseudomonas aeruginosa
GCA_039413765.1	JBCIXR000000000	SAMN41088433	PA-D19	Pseudomonas aeruginosa
GCA_039413755.1	JBCIXT000000000	SAMN41088431	PA-D17	Pseudomonas aeruginosa
GCA_039413735.1	JBCIXS000000000	SAMN41088432	PA-D18	Pseudomonas aeruginosa
GCA_039413715.1	JBCIXQ000000000	SAMN41088434	PA-D2	Pseudomonas aeruginosa
GCA_039413675.1	JBCIXL000000000	SAMN41088440	PA-D27	Pseudomonas aeruginosa
GCA_039413685.1	JBCIXP000000000	SAMN41088435	PA-D21	Pseudomonas aeruginosa
GCA_039413655.1	JBCIXO000000000	SAMN41088436	PA-D22	Pseudomonas aeruginosa
GCA_039413635.1	JBCIXN000000000	SAMN41088437	PA-D23	Pseudomonas aeruginosa
GCA_039413615.1	JBCIXM000000000	SAMN41088438	PA-D24	Pseudomonas aeruginosa
GCA_039414215.1	JBCIYN000000000	SAMN41088410	PA-A13	Pseudomonas aeruginosa
GCA_039414195.1	JBCIYO000000000	SAMN41088409	PA-A12	Pseudomonas aeruginosa
GCA_039414175.1	JBCIYM000000000	SAMN41088411	PA-A14	Pseudomonas aeruginosa
GCA_039414155.1	JBCIYL000000000	SAMN41088413	PA-A19	Pseudomonas aeruginosa
GCA_039414135.1	JBCIYK000000000	SAMN41088414	PA-A2-1F	Pseudomonas aeruginosa
GCA_039414115.1	JBCIYJ000000000	SAMN41088415	PA-A2-1LC	Pseudomonas aeruginosa
GCA_039414095.1	JBCIYI000000000	SAMN41088416	PA-A22	Pseudomonas aeruginosa
GCA_039414075.1	JBCIYH000000000	SAMN41088417	PA-A23	Pseudomonas aeruginosa
GCA_039413575.1	JBCIXK000000000	SAMN41088441	PA-D28	Pseudomonas aeruginosa
GCA_039413555.1	JBCIXJ000000000	SAMN41088442	PA-D29	Pseudomonas aeruginosa
GCA_039413535.1	JBCIXI000000000	SAMN41088443	PA-D3	Pseudomonas aeruginosa
GCA_039413515.1	JBCIXG000000000	SAMN41088445	PA-D31-1	Pseudomonas aeruginosa
GCA_039413495.1	JBCIXH000000000	SAMN41088444	PA-D30	Pseudomonas aeruginosa
GCA_039413475.1	JBCIXE000000000	SAMN41088447	PA-D33	Pseudomonas aeruginosa
GCA_039413455.1	JBCIXF000000000	SAMN41088446	PA-D31-2	Pseudomonas aeruginosa
GCA_039413435.1	JBCIXC000000000	SAMN41088449	PA-D35	Pseudomonas aeruginosa
GCA_039413415.1	JBCIXD000000000	SAMN41088448	PA-D34	Pseudomonas aeruginosa
GCA_039413395.1	JBCIXB000000000	SAMN41088450	PA-D38	Pseudomonas aeruginosa
GCA_039413375.1	JBCIWX000000000	SAMN41088454	PA-D43	Pseudomonas aeruginosa
GCA_039413355.1	JBCIXA000000000	SAMN41088451	PA-D4	Pseudomonas aeruginosa
GCA_039413335.1	JBCIWZ000000000	SAMN41088452	PA-D40	Pseudomonas aeruginosa
GCA_039413315.1	JBCIWY000000000	SAMN41088453	PA-D41	Pseudomonas aeruginosa
GCA_039413295.1	JBCIWV000000000	SAMN41088456	PA-D45	Pseudomonas aeruginosa
GCA_039413275.1	JBCIWW000000000	SAMN41088455	PA-D44	Pseudomonas aeruginosa
GCA_039413245.1	JBCIWT000000000	SAMN41088458	PA-D7	Pseudomonas aeruginosa
GCA_039413235.1	JBCIWS000000000	SAMN41088459	PA-D8	Pseudomonas aeruginosa
GCA_039413215.1	JBCIWU000000000	SAMN41088457	PA-D6	Pseudomonas aeruginosa
GCA_039413195.1	JBCIWR000000000	SAMN41088460	PA-K100	Pseudomonas aeruginosa
GCA_039413175.1	JBCIWP000000000	SAMN41088462	PA-K152	Pseudomonas aeruginosa
GCA_039413155.1	JBCIWQ000000000	SAMN41088461	PA-K124	Pseudomonas aeruginosa
GCA_039413135.1	JBCIWN000000000	SAMN41088464	PA-K227	Pseudomonas aeruginosa
GCA_039413115.1	JBCIWO000000000	SAMN41088463	PA-K16	Pseudomonas aeruginosa
GCA_039413095.1	JBCIWM000000000	SAMN41088465	PA-K36	Pseudomonas aeruginosa
GCA_039413075.1	JBCIWL000000000	SAMN41088466	PA-K37	Pseudomonas aeruginosa
GCA_039413055.1	JBCIWK000000000	SAMN41088467	PA-K44	Pseudomonas aeruginosa
GCA_039413035.1	JBCIWJ000000000	SAMN41088468	PA-K52	Pseudomonas aeruginosa
GCA_039413015.1	JBCIWI000000000	SAMN41088469	PA-K57	Pseudomonas aeruginosa
GCA_039412995.1	JBCIWH000000000	SAMN41088470	PA-K6	Pseudomonas aeruginosa
GCA_039412975.1	JBCIWG000000000	SAMN41088471	PA-K72	Pseudomonas aeruginosa
GCA_039412955.1	JBCIWF000000000	SAMN41088472	PA-K83	Pseudomonas aeruginosa
GCA_039412935.1	JBCIWE000000000	SAMN41088473	PA-K94	Pseudomonas aeruginosa
GCA_039412915.1	JBCIWA000000000	SAMN41088478	PA-P28	Pseudomonas aeruginosa
GCA_039412895.1	JBCIVV000000000	SAMN41088483	PA-P62	Pseudomonas aeruginosa
GCA_039412875.1	JBCIWD000000000	SAMN41088474	PA-P103	Pseudomonas aeruginosa
GCA_039412855.1	JBCIWB000000000	SAMN41088476	PA-P24	Pseudomonas aeruginosa
GCA_039412835.1	JBCIWC000000000	SAMN41088475	PA-P109	Pseudomonas aeruginosa
GCA_039412815.1	JBCIVZ000000000	SAMN41088479	PA-P31	Pseudomonas aeruginosa
GCA_039412795.1	JBCIVY000000000	SAMN41088480	PA-P36	Pseudomonas aeruginosa
GCA_039412775.1	JBCIVX000000000	SAMN41088481	PA-P4	Pseudomonas aeruginosa
GCA_039412755.1	JBCIVW000000000	SAMN41088482	PA-P57	Pseudomonas aeruginosa
GCA_039412735.1	JBCIVT000000000	SAMN41088485	PA-P80	Pseudomonas aeruginosa
GCA_039412715.1	JBCIVU000000000	SAMN41088484	PA-P67	Pseudomonas aeruginosa
GCA_039412695.1	JBCIVS000000000	SAMN41088486	PA-P88	Pseudomonas aeruginosa
GCA_039412675.1	JBCIVR000000000	SAMN41088487	PA-P96	Pseudomonas aeruginosa
GCA_039941175.1	JBDUVE000000000	SAMN41088477	PA-P25	Pseudomonas aeruginosa

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Genomic epidemiology of carbapenem-resistant Pseudomonas aeruginosa in the northeastern regions of South Africa

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