BioProject

Polyopes affinis is a red algal species commonly found on the South coast and near Jeju Island, Korea. More...

Polyopes affinis is a red algal species commonly found on the South coast and near Jeju Island, Korea. This study aimed to determine whether P. affinis extracts can inhibit the pathogenesis of T-helper-2 (Th2)-mediated inflammation in a human keratinocyte cell line of atopic dermatitis (AD). Cells were incubated with 10 ng/mL of interferon gamma (IFN-γ) and 10 ng/mL of tumor necrosis factor-alpha (TNF-α) at various concentrations of PAB (10, 30, and 60 µg/mL) and PAA (100, 500, and 1,000 µg/mL) extracts. A gene-ontology (GO)-enrichment analysis revealed that PAB significantly enriched the genes associated with biological processes such as cell adhesion, immune response, inflammation, and chemokine-mediated pathways. PAB suppressed the ex-pression of the secretory proteins and mRNAs that are associated with the thymus and the production of activation-regulated chemokines (TARC/CCL17) and macrophage-derived chemo-kines (MDC/CCL22). The effect of the extract on mitogen-activated protein kinases (MAPKs) was related to its inhibition of TARC/CCL17 and MDC/CCL22 production by blocking NF-κB and STAT1 activation. These results suggest that seaweed extract may improve AD by regulating pro-inflammatory chemokines. In conclusion, we first confirmed the existence of phloroglucinol, a polyphenol formed from a precursor called phlorotannin, which is present in PAB, and this result proved the possibility of PAB being used as a treatment for AD. Overall design: To investigate target genes and mechanism related to anti-inflammation by Polyopes affinis extract in HaCaT cell line stimulated with IFN-γ and TNF-α, we performed gene expression profiling analysis using data obtained from RNA-Seq of 3 groups(solvent control group, IFN-γ and TNF-α treated group, Polyopes affinis extract with IFN-γ and TNF-α treated group). Each group was treated with three dishes, and the RNA obtained from each dish was pooled after adjusting the concentration for RNA sequencing. Less...