Oreochromis niloticus isolate:F11D_XX (ID 344471) - BioProject

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Accession: PRJNA344471 ID: 344471

Oreochromis niloticus isolate:F11D_XX (Nile tilapia)

Oreochromis niloticus isolate:F11D_XX Genome sequencing and assembly

See Genome Information for Oreochromis niloticus

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144 additional projects are related by organism.

This study provides a new and improved genome assembly of the nile tilapia, Oreochromis niloticus, one of the most important farmed fishes in the world. More...

Accession	PRJNA344471
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Oreochromis niloticus[Taxonomy ID: 8128] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis; Oreochromis niloticus
Publications	Conte MA et al., "A high quality assembly of the Nile Tilapia (Oreochromis niloticus) genome reveals the structure of two sex determination regions.", BMC Genomics, 2017 May 2;18(1):341
Grants	"Closing the tilapia genome assembly" (Grant ID 2015-67015-23088, United States Dept of Agriculture)
Submission	Registration date: 31-Oct-2016 University of Maryland
Related Resources	Bouillabase.org
Relevance	Agricultural
Locus Tag Prefix	BI325

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	23
WGS master	1
SRA Experiments	63
Publications
PubMed	1
PMC	1
Other datasets
BioSample	2
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_001858045.3	Chromosome	MKQE00000000	22	SAMN05859795	Oreochromis niloticus

SRA Data Details

Parameter	Value
Data volume, Gbases	71
Data volume, Tbytes	0.25

Related RefSeq Project

PRJNA354796 : Oreochromis niloticus isolate:F11D_XX RefSeq Genome sequencing and assembly

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Oreochromis niloticus isolate:F11D_XX (Nile tilapia)

Oreochromis niloticus isolate:F11D_XX Genome sequencing and assembly

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