Oryza alta strain:IRGC:105143 (ID 48111) - BioProject

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Accession: PRJNA48111 ID: 48111

Oryza alta strain:IRGC:105143

OMAP clone end sequence project for Oryza alta

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This project is a component of the The Oryza Map Alignment Project is a comparative genomics project for all ten genome types in rice

This project is a component of the Comparison of transposable elements across the various genome types of the Oryza genus

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5 additional projects are related by organism.

16 additional projects are components of the The Oryza Map Alignment Project is a comparative genomics project for all ten genome types in rice.

15 additional projects are components of the Comparison of transposable elements across the various genome types of the Oryza genus.

Oryza alta is a wild rice found in South America. It has a CCDD genome. Breeders are interested in this organism because of it exhibits increased biomass and traits thought to be responsible for yield. More...

Accession	PRJNA48111
Data Type	Clone ends
Scope	Monoisolate
Organism	Oryza alta[Taxonomy ID: 52545] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza alta
Publications	Zuccolo A et al., "Transposable element distribution, abundance and role in genome size variation in the genus Oryza.", BMC Evol Biol, 2007 Aug 29;7:152 Ammiraju JS et al., "The Oryza bacterial artificial chromosome library resource: construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza.", Genome Res, 2006 Jan;16(1):140-7
Submission	Registration date: 27-Apr-2010 Oryza Map Alignment Project (OMAP) - Arizona Genomics Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	7537
Publications
PubMed	2
PMC	2
Other datasets
BioSample	1

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Oryza alta strain:IRGC:105143

OMAP clone end sequence project for Oryza alta

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