Salmonella enterica (ID 578395) - BioProject

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Accession: PRJNA578395 ID: 578395

Salmonella enterica

GenomeTrakr Project: Kentucky Department for Public Health

See Genome Information for Salmonella enterica

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This project is a component of the GenomeTrakr umbrella project for Salmonella enterica

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3908 additional projects are related by organism.

75 additional projects are components of the GenomeTrakr umbrella project for Salmonella enterica.

Whole genome sequencing of cultured Salmonella enterica as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA578395
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Submission	Registration date: 12-Mar-2020 FDA Center for Food Safety and Applied Nutrition
Related Resources	Kentucky Department for Public Health - Division of Laboratory Services
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	98
SRA Experiments	98
Other datasets
BioSample	98
Assembly	98

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

98
98

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_013515715.1	AAUARA000000000	SAMN15508308	M20-177-5-KY-M05619-200619	Salmonella enterica
GCA_013514395.1	AAUAPD000000000	SAMN15508358	M20-175-3-KY-M05619-200619	Salmonella enterica
GCA_013514535.1	AAUAPH000000000	SAMN15508357	M20-183-10-KY-M05619-200619	Salmonella enterica
GCA_013514515.1	AAUAPF000000000	SAMN15508337	M20-179-7-KY-M05619-200619	Salmonella enterica
GCA_013514495.1	AAUAPG000000000	SAMN15508355	M20-178-6-KY-M05619-200619	Salmonella enterica
GCA_013514155.1	AAUAPX000000000	SAMN15508323	M20-188-KY-M05619-200619	Salmonella enterica
GCA_013515215.1	AAUAQM000000000	SAMN15508335	M20-174-1-KY-M05619-200619	Salmonella enterica
GCA_013514875.1	AAUAQD000000000	SAMN15508321	M20-184-11-KY-M05619-200619	Salmonella enterica
GCA_013515075.1	AAUAPW000000000	SAMN15508352	M20-186-13-KY-M05619-200619	Salmonella enterica
GCA_013514735.1	AAUAPQ000000000	SAMN15508339	M20-176-4-KY-M05619-200619	Salmonella enterica
GCA_013514785.1	AAUAQB000000000	SAMN15508351	M20-187-KY-M05619-200619	Salmonella enterica
GCA_013514815.1	AAUAQC000000000	SAMN15508329	M20-180-8-KY-M05619-200619	Salmonella enterica
GCA_013513955.1	AAUAPS000000000	SAMN15508330	M20-185-12-KY-M05619-200619	Salmonella enterica
GCA_011694315.1	AAQRJR000000000	SAMN14207024	CNSV-T31-MA06-TT-10-B	Salmonella enterica
GCA_011694205.1	AAQRJE000000000	SAMN14207270	CNSV-T34-MA10-RV-10-C	Salmonella enterica
GCA_011693915.1	AAQRIX000000000	SAMN14207197	CNSV-T34-MA04-TT-10-B	Salmonella enterica
GCA_011692795.1	AAQRKS000000000	SAMN14207141	CNSV-T29-MA06-RV-10-C	Salmonella enterica
GCA_011694575.1	AAQRJQ000000000	SAMN14207026	CNSV-T31-MA05-RV-10-B	Salmonella enterica
GCA_011695255.1	AAQRMW000000000	SAMN14207570	CNSV-T29-MA05-RV-10-A	Salmonella enterica
GCA_011692595.1	AAQRGO000000000	SAMN14207278	CNSV-T31-MA12-TT-10-B	Salmonella enterica
GCA_011692575.1	AAQRGP000000000	SAMN14207128	CNSV-T31-MA06-RV-10-B	Salmonella enterica
GCA_011695015.1	AAQRMX000000000	SAMN14207022	CNSV-T31-MA05-TT-10-A	Salmonella enterica
GCA_011691795.1	AAQRGT000000000	SAMN14207157	CNSV-T35-MA11-RV-10-A	Salmonella enterica
GCA_011691655.1	AAQRGS000000000	SAMN14207194	CNSV-T33-MA12-RV-10-A	Salmonella enterica
GCA_011689635.1	AAQRCN000000000	SAMN14207139	CNSV-T35-MA11-TT-10-B	Salmonella enterica
GCA_011671545.1	AAQPZS000000000	SAMN14207168	CNSV-T35-MA11-RV-10-B	Salmonella enterica
GCA_011671385.1	AAQQBK000000000	SAMN14207276	CNSV-T34-MA11-RV-10-B	Salmonella enterica
GCA_011669205.1	AAQPVE000000000	SAMN14207191	CNSV-T33-MA12-RV-10-B	Salmonella enterica
GCA_011669145.1	AAQPUX000000000	SAMN14207030	CNSV-T31-MA05-TT-10-B	Salmonella enterica
GCA_011673585.1	AAQQBT000000000	SAMN14207199	CNSV-T34-MA04-TT-10-A	Salmonella enterica
GCA_011673565.1	AAQQBY000000000	SAMN14207167	CNSV-T30-MA06-RV-10-B	Salmonella enterica
GCA_011673365.1	AAQQCK000000000	SAMN14207140	CNSV-T29-MA06-TT-10-B	Salmonella enterica
GCA_011673345.1	AAQQCM000000000	SAMN14207214	CNSV-T34-MA11-RV-10-A	Salmonella enterica
GCA_011673285.1	AAQQBQ000000000	SAMN14207027	CNSV-T31-MA05-RV-10-A	Salmonella enterica
GCA_011673245.1	AAQQBR000000000	SAMN14207159	CNSV-T35-MA04-RV-10-A	Salmonella enterica
GCA_011685735.1	AAQQVF000000000	SAMN14207127	CNSV-T31-MA06-RV-10-A	Salmonella enterica
GCA_011675735.1	AAQQJW000000000	SAMN14207145	CNSV-T30-MA04-RV-10-C	Salmonella enterica
GCA_011658675.1	AAQPAT000000000	SAMN14207130	CNSV-T31-MA12-RV-10-B	Salmonella enterica
GCA_011676355.1	AAQQKP000000000	SAMN14207155	CNSV-T34-MA11-TT-10-A	Salmonella enterica
GCA_011676275.1	AAQQKO000000000	SAMN14207162	CNSV-T34-MA11-TT-10-B	Salmonella enterica
GCA_011659655.1	AAQPCX000000000	SAMN14207169	CNSV-T30-MA05-TT-10-B	Salmonella enterica
GCA_011659695.1	AAQPCN000000000	SAMN14207170	CNSV-T35-MA04-RV-10-B	Salmonella enterica
GCA_011677175.1	AAQQCY000000000	SAMN14207025	CNSV-T31-MA06-TT-10-A	Salmonella enterica
GCA_011678355.1	AAQQFR000000000	SAMN14207272	CNSV-T31-MA12-TT-10-A	Salmonella enterica
GCA_011678235.1	AAQQFQ000000000	SAMN14207173	CNSV-T29-MA05-RV-1-A	Salmonella enterica
GCA_011661995.1	AAQPIG000000000	SAMN14207273	CNSV-T29-MA06-RV-10-A	Salmonella enterica
GCA_011662995.1	AAQPJK000000000	SAMN14207182	CNSV-T34-MA04-RV-10-B	Salmonella enterica
GCA_011663055.1	AAQPKD000000000	SAMN14207175	CNSV-T35-MA04-TT-10-B	Salmonella enterica
GCA_011663335.1	AAQPJW000000000	SAMN14207572	CNSV-T34-MA04-RV-10-A	Salmonella enterica
GCA_011663295.1	AAQPJZ000000000	SAMN14207174	CNSV-T30-MA06-RV-10-A	Salmonella enterica
GCA_011664155.1	AAQPLG000000000	SAMN14207126	CNSV-T30-MA05-RV-10-B	Salmonella enterica
GCA_011663975.1	AAQPKR000000000	SAMN14207144	CNSV-T30-MA05-RV-10-A	Salmonella enterica
GCA_011663895.1	AAQPKW000000000	SAMN14207166	CNSV-T35-MA04-TT-10-A	Salmonella enterica
GCA_011664935.1	AAQPNG000000000	SAMN14207142	CNSV-T31-MA12-RV-10-A	Salmonella enterica
GCA_011759305.1	AAQVUI000000000	SAMN14453520	CNSV-T32-MA04-TT-10-B	Salmonella enterica
GCA_011761165.1	AAQVUS000000000	SAMN14453526	CNSV-T33-MA10-TT-10-C	Salmonella enterica
GCA_011761025.1	AAQVVD000000000	SAMN14453547	CNSV-T32-MA04-RV-10-A	Salmonella enterica
GCA_011761045.1	AAQVUY000000000	SAMN14453536	CNSV-T32-MA04-RV-10-B	Salmonella enterica
GCA_011761005.1	AAQVVB000000000	SAMN14453540	CNSV-T32-MA05-TT-10-A	Salmonella enterica
GCA_011760985.1	AAQVUX000000000	SAMN14453537	CNSV-T32-MA05-TT-10-B	Salmonella enterica
GCA_011760905.1	AAQVUZ000000000	SAMN14453553	CNSV-T32-MA12-RV-10-B	Salmonella enterica
GCA_011760915.1	AAQVUO000000000	SAMN14453543	CNSV-T31-MA04-TT-0.1-B	Salmonella enterica
GCA_011760885.1	AAQVUU000000000	SAMN14453541	CNSV-T32-MA12-TT-10-B	Salmonella enterica
GCA_011760855.1	AAQVUT000000000	SAMN14453539	CNSV-T32-MA04-TT-10-A	Salmonella enterica
GCA_011760825.1	AAQVVA000000000	SAMN14453535	CNSV-T32-MA12-RV-10-A	Salmonella enterica
GCA_011760805.1	AAQVUW000000000	SAMN14453538	CNSV-T32-MA12-TT-10-A	Salmonella enterica
GCA_011760765.1	AAQVUP000000000	SAMN14453524	CNSV-T33-MA10-RV-10-A	Salmonella enterica
GCA_011760735.1	AAQVUQ000000000	SAMN14453518	CNSV-T32-MA05-RV-10-B	Salmonella enterica
GCA_011760725.1	AAQVUM000000000	SAMN14453530	CNSV-T32-MA05-RV-10-C	Salmonella enterica
GCA_011759795.1	AAQVVF000000000	SAMN14453554	CNSV-T33-MA10-TT-10-A	Salmonella enterica
GCA_011694235.1	AAQRJM000000000	SAMN14207125	CNSV-T30-MA05-TT-10-A	Salmonella enterica
GCA_011719035.1	AAQTEZ000000000	SAMN14406260	CNSV-T31-MA04-TT-0.1-A	Salmonella enterica
GCA_011718835.1	AAQTER000000000	SAMN14405147	CNSV-T31-MA04-RV-0.1-B	Salmonella enterica
GCA_011718795.1	AAQTEU000000000	SAMN14406262	CNSV-T30-MA04-TT-0.1-B	Salmonella enterica
GCA_011718995.1	AAQTFB000000000	SAMN14405148	CNSV-T30-MA04-TT-0.1-A	Salmonella enterica
GCA_011718435.1	AAQTDZ000000000	SAMN14406261	CNSV-T31-MA04-RV-0.1-A	Salmonella enterica
GCA_011673625.1	AAQQBU000000000	SAMN14207177	CNSV-T34-MA10-RV-10-A	Salmonella enterica
GCA_011673665.1	AAQQBZ000000000	SAMN14207573	CNSV-T29-MA05-TT-10-A	Salmonella enterica
GCA_011673725.1	AAQQCA000000000	SAMN14207188	CNSV-T33-MA10-RV-10-C	Salmonella enterica
GCA_011673685.1	AAQQBW000000000	SAMN14207279	CNSV-T29-MA05-TT-10-B	Salmonella enterica
GCA_011673895.1	AAQQCG000000000	SAMN14207172	CNSV-T35-MA11-TT-10-A	Salmonella enterica
GCA_011657435.1	AAQPBA000000000	SAMN14207143	CNSV-T30-MA04-RV-10-A	Salmonella enterica
GCA_011348105.1	AAPWOM000000000	SAMN14008813	CNSV-T27-MA05-RV-1-A	Salmonella enterica
GCA_011301675.1	AAPTRZ000000000	SAMN14008853	CNSV-T26-MA06-RV-10-A	Salmonella enterica
GCA_011301655.1	AAPTSC000000000	SAMN14010003	CNSV-T29-MA11-TT-10-A	Salmonella enterica
GCA_011302925.1	AAPTRY000000000	SAMN14008838	CNSV-T29-MA11-RV-10-C	Salmonella enterica
GCA_011302755.1	AAPTSA000000000	SAMN14008730	CNSV-T29-MA10-RV-0.1-A	Salmonella enterica
GCA_011300975.1	AAPTQT000000000	SAMN14008502	CNSV-T27-MA05-RV-10-A	Salmonella enterica
GCA_011300755.1	AAPTQQ000000000	SAMN14008498	CNSV-T29-MA04-RV-10-C	Salmonella enterica
GCA_011240955.1	AAPQGY000000000	SAMN14008729	CNSV-T26-MA06-TT-10-A	Salmonella enterica
GCA_011239555.1	AAPQFD000000000	SAMN14008496	CNSV-T29-MA04-RV-10-A	Salmonella enterica
GCA_011239115.1	AAPQEP000000000	SAMN14010000	CNSV-T27-MA05-TT-1-A	Salmonella enterica
GCA_011239035.1	AAPQEJ000000000	SAMN14008861	CNSV-T29-MA11-TT-10-B	Salmonella enterica
GCA_011238795.1	AAPQDY000000000	SAMN14008728	CNSV-T26-MA06-TT-10-B	Salmonella enterica
GCA_011238735.1	AAPQEC000000000	SAMN14009999	CNSV-T29-MA10-TT-0.1-B	Salmonella enterica
GCA_011236335.1	AAPPZW000000000	SAMN14008497	CNSV-T26-MA06-RV-10-B	Salmonella enterica
GCA_011289205.1	AAPQRR000000000	SAMN14008499	CNSV-T29-MA10-RV-1-A	Salmonella enterica
GCA_014343815.1	AAVPTX000000000	SAMN14008854	CNSV-T26-MA04-RV-10-B	Salmonella enterica

SRA Data Details

Parameter	Value
Data volume, Gbases	47
Data volume, Mbytes	29037

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Salmonella enterica

GenomeTrakr Project: Kentucky Department for Public Health

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