Clostridioides difficile (ID 598327) - BioProject

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Accession: PRJNA598327 ID: 598327

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

See Genome Information for Clostridioides difficile

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743 additional projects are related by organism.

This study aims to: evaluate, using the total genome sequencing of isolates of Clostridioides difficile, the resistance mechanisms and virulence genes.

Accession	PRJNA598327
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Clostridioides difficile[Taxonomy ID: 1496] Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile
Submission	Registration date: 31-Mar-2020 University of Sao Paulo
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	36
Other datasets
BioSample	40
Assembly	36

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

36
36

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_012955965.1	JABBZI000000000	SAMN14595376	HC132	Clostridioides difficile
GCA_012955915.1	JABBZF000000000	SAMN14595372	HC45	Clostridioides difficile
GCA_012956715.1	JABBZH000000000	SAMN14595375	HC131	Clostridioides difficile
GCA_012956705.1	JABBZG000000000	SAMN14595373	HU58	Clostridioides difficile
GCA_012030175.1	JAAUXG000000000	SAMN13703025	HC129	Clostridioides difficile
GCA_012030135.1	JAAUXI000000000	SAMN13703031	HC204	Clostridioides difficile
GCA_012030125.1	JAAUXL000000000	SAMN13703035	HU45	Clostridioides difficile
GCA_012030115.1	JAAUXJ000000000	SAMN13703033	HU39	Clostridioides difficile
GCA_012030095.1	JAAUXK000000000	SAMN13703034	HU41	Clostridioides difficile
GCA_012030445.1	JAATWQ000000000	SAMN13703020	OC101	Clostridioides difficile
GCA_012029905.1	JAATWN000000000	SAMN13703017	HC20	Clostridioides difficile
GCA_012029845.1	JAATWO000000000	SAMN13703018	HC89	Clostridioides difficile
GCA_012029835.1	JAATWP000000000	SAMN13703019	OC96	Clostridioides difficile
GCA_012029785.1	JAAUXM000000000	SAMN13703036	HU74	Clostridioides difficile
GCA_012029735.1	JAAUXH000000000	SAMN13703028	HC164	Clostridioides difficile
GCA_011812885.1	JAATKX000000000	SAMN13703003	SJ13A	Clostridioides difficile
GCA_011812895.1	JAATKY000000000	SAMN13703002	SJ06	Clostridioides difficile
GCA_011881545.1	JAATNS000000000	SAMN13703016	HC71	Clostridioides difficile
GCA_011881465.1	JAATNQ000000000	SAMN13703012	HC59	Clostridioides difficile
GCA_011881435.1	JAATNN000000000	SAMN13703009	HC51	Clostridioides difficile
GCA_011881455.1	JAATNP000000000	SAMN13703011	HC58	Clostridioides difficile
GCA_011881445.1	JAATNR000000000	SAMN13703015	HC68	Clostridioides difficile
GCA_011882295.1	JAATNJ000000000	SAMN13703006	HC22	Clostridioides difficile
GCA_011882305.1	JAATNM000000000	SAMN13703008	HC48	Clostridioides difficile
GCA_011882285.1	JAATNI000000000	SAMN13703007	HC31A	Clostridioides difficile
GCA_011882245.1	JAATNL000000000	SAMN13703004	HU15A	Clostridioides difficile
GCA_011882255.1	JAATNK000000000	SAMN13703005	HC11A	Clostridioides difficile
GCA_011881745.1	JAATNO000000000	SAMN13703010	HC52	Clostridioides difficile
GCA_012102905.1	JAAVTQ000000000	SAMN13703022	HC109	Clostridioides difficile
GCA_012102895.1	JAAVSO000000000	SAMN13703021	OC108	Clostridioides difficile
GCA_012276965.1	JAAXLO000000000	SAMN13703026	HC139	Clostridioides difficile
GCA_012276945.1	JAAXLR000000000	SAMN13703032	HC208	Clostridioides difficile
GCA_012276925.1	JAAXLN000000000	SAMN13703024	HC115	Clostridioides difficile
GCA_012277145.1	JAAXLQ000000000	SAMN13703030	HC191	Clostridioides difficile
GCA_012277125.1	JAAXLP000000000	SAMN13703027	HC142	Clostridioides difficile
GCA_012276915.2	JAAXLM000000000	SAMN13703023	OC110	Clostridioides difficile

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Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

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