Caenorhabditis modENCODE Project (ID 63453) - BioProject

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Accession: PRJNA63453 ID: 63453

Caenorhabditis modENCODE Project

See Genome Information for Caenorhabditis elegans

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1 additional project is a component of the The Model Organism ENCyclopedia Of DNA Elements (modENCODE) Project.

The C. elegans modENCODE project.

Accession	PRJNA63453
Type	Umbrella project (Subtype:Funding initiative)
Organism	Caenorhabditis elegans[Taxonomy ID: 6239] Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans
Submission	Registration date: 4-Mar-2011 The modENCODE Consortium

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	666
WGS master	1
SRA Experiments	2273
Capillary Traces (Trace Archive)	1
Publications
PubMed	1
PMC	1
Other datasets
BioSample	2216
GEO DataSets	530
Assembly	1

Parameter	Value
Data volume, Spots	150521368
Data volume, Processed Mbytes	3906
Data volume, Supplementary Mbytes	102978

Parameter	Value
Data volume, Gbases	1,991
Data volume, Tbytes	1.45

Caenorhabditis modENCODE Project encompasses the following 6 sub-projects:

Project Type

Number of Projects

Epigenomics

BioProject accession	Organism	Title
PRJNA63455	Caenorhabditis elegans	Epigenomics projects for the C. elegans modENCODE project. (The modENCODE Consortium)

Other

BioProject accession	Organism	Title
PRJNA63461	Caenorhabditis elegans	Functional genomics project for the for the C. elegans modENCODE Project. (The modENCODE Consortium)

Transcriptome or Gene expression

BioProject accession	Organism	Title
PRJNA75295	Caenorhabditis	Deep sequencing of nematode transcriptomes using RNA isolated from various developmental stages under various experimental conditions (modENCODE)
PRJNA33023	Caenorhabditis elegans	Deep sequencing of the Caenorhabditis elegans transcriptome using RNA isolated from various developmental stages under various experimental conditions (modENCODE)

Umbrella project

BioProject accession	Organism	Title
PRJNA63457	Caenorhabditis elegans	Transcriptome analysis for the C. elegans modENCODE Project. (The modENCODE Consortium)
PRJNA75267	Nematoda	modENCODE Nematode reference genome sequencing (The modENCODE Consortium)