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Genome Information for Trifolium dubium
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This project collects the sequencing data and assemblies generated for Trifolium dubium as part of the European Reference Genome Atlas Pilot Project (https://www.erga-biodiversity.eu/pilot-project) and the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/). The assembly is provided by the Wellcome Sanger Institute Tree of Life Programme (https://www.sanger.ac.uk/programme/tree-of-life/) in collaboration with Ann Mc Cartney (University of California Santa Cruz, species ambassador ERGA) and the European Reference Genome Atlas Pilot Project team.
Accession | PRJEB59394 |
Type | Umbrella project |
Organism | Trifolium dubium[Taxonomy ID: 97021] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium; Trifolium dubium |
Submission | Registration date: 31-Jan-2023 WELLCOME SANGER INSTITUTE |
Project Data:
Resource Name | Number of Links |
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Sequence data |
Nucleotide (total) | 20 |
WGS master | 2 |
Genomic DNA | 18 |
SRA Experiments | 3 |
Other datasets |
BioSample | 4 |
Assembly | 2 |
drTriDubi encompasses the following 3 sub-projects:
Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Contigs Total | 1 1 2
|
BioProject accession | Assembly level | Organism | Title |
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PRJEB62713 | Chromosomes | Trifolium dubium | Trifolium dubium genome assembly, drTriDubi3 (WELLCOME SANGER INSTITUTE) | PRJEB62712 | Contigs | Trifolium dubium | Trifolium dubium genome assembly, drTriDubi3, alternate haplotype (WELLCOME SANGER INSTITUTE) |
|
Other | 1 |
BioProject accession | Organism | Title |
---|
PRJEB59393 | Trifolium dubium | Trifolium dubium, genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
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