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Items: 12

1.

Transcription processes compete with loop extrusion to homogenize promoter and enhancer dynamics

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Other
Scope:
Multiisolate
IGBMC (Institute of Genetics and Molecular and Cellular Biology)
Accession:
PRJNA958114
ID:
958114

2.

Sex-biased and parental allele-specific gene regulation by KDM6A [ATAC-seq]

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Epigenomics
Scope:
Multiisolate
University of California Riverside
Accession:
PRJNA862471
ID:
862471

3.

Sex-biased and parental allele-specific gene regulation by KDM6A [ChIP-seq]

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Epigenomics
Scope:
Multiisolate
University of California Riverside
Accession:
PRJNA862470
ID:
862470

4.

Sex-biased and parental allele-specific gene regulation by KDM6A [RNA-seq]

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of California Riverside
Accession:
PRJNA862469
ID:
862469

5.

Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus.

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Other
Scope:
Multiisolate
IGBMC (Institute of Genetics and Molecular and Cellular Biology)
Accession:
PRJNA802654
ID:
802654

6.

Xist-seeded nucleation sites form local concentration gradients of silencing proteins to inactivate the X-chromosome [II]

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Other
Scope:
Multiisolate
University of California, Los Angeles
Accession:
PRJNA751096
ID:
751096

7.

CRISPR-Assisted Detection of RNA-Protein Interactions in Living Cells

Project data type: Transcriptome or Gene expression
Scope:
Multispecies
Yan Lab, Department of Biomedical Sciences, City University of Hong Kong
Accession:
PRJNA565917
ID:
565917

8.

Dynamic Erasure of Random X-Chromosome Inactivation during iPSC Reprogramming

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Development and Regeneration, KU Leuven
Accession:
PRJNA521357
ID:
521357

9.

X Chromosome Dosage Modulates Multiple Molecular and Cellular Properties of Mouse Pluripotent Stem Cells Independently of Global DNA Methylation Levels

Project data type: Other
Scope:
Multispecies
Development and Regeneration, KU Leuven
Accession:
PRJNA433190
ID:
433190

10.

Open chromatin in somatic cells transplanted into Xenopus oocytes

Project data type: Epigenomics
Scope:
Multispecies
Gurdon Institute, University of Cambridge
Accession:
PRJNA386179
ID:
386179

11.

Mus musculus musculus x Mus musculus castaneus

A high-throughput small molecule screen identifies synergism between DNA methylation and Aurora kinase pathways for X-chromosome reactivation

Taxonomy:
Mus musculus musculus x Mus musculus castaneus
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Lee Lab, Molecular Biology, Mass General Hospital
Accession:
PRJNA336175
ID:
336175

12.

DUSP9 Modulates DNA Hypomethylation in Female Mouse Pluripotent Stem Cells

Project data type: Epigenomics
Scope:
Multispecies
Meissner Lab, Harvard University
Accession:
PRJNA283520
ID:
283520

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