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Accession: PRJNA189465 ID: 189465

Comparative Genomics and Transcriptomics of Phytophthora parasitica

See Genome Information for Phytophthora nicotianae
Comparative sequencing of several strains of Phytophthora parasitica
AccessionPRJNA189465
TypeUmbrella Comparative genomics project (Subtype:Comparative genomics)
OrganismPhytophthora nicotianae[Taxonomy ID: 4792]
Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae
SubmissionRegistration date: 14-Feb-2013
Broad Institute
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)26821
WGS master4
SRA Experiments8
Protein Sequences106586
Other datasets
BioSample8
Assembly4
SRA Data Details
ParameterValue
Data volume, Gbases77
Data volume, Mbytes40708
This project encompasses the following 5 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds

4
BioProject
accession
Assembly
level
OrganismTitle
PRJNA205153 ScaffoldsPhytophthora nicotianaePhytophthora parasitica genome sequencing (Broad Institute)
PRJNA205154 ScaffoldsPhytophthora nicotianaePhytophthora parasitica genome sequencing (Broad Institute)
PRJNA205155 ScaffoldsPhytophthora nicotianaePhytophthora parasitica genome sequencing (Broad Institute)
PRJNA205156 ScaffoldsPhytophthora nicotianaePhytophthora parasitica genome sequencing (Broad Institute)
transcriptome1
BioProject
accession
OrganismTitle
PRJNA189463Phytophthora nicotianaeComparative Transcriptomics of Phytophthora parasitica (Broad Institute)

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