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Accession: PRJNA27925 ID: 27925

Plasmodium falciparum (malaria parasite P. falciparum)

Comparative genome sequencing project of Plasmodium falciparum strains

See Genome Information for Plasmodium falciparum

The genomes of different strains from Plasmodium falciparum have been sequenced in an effort to understand evolutionary aspects of this parasite that may be related to its biology and pathogenicity.

Comparative analyses between the genome sequences of different strains should provide invaluable information regarding mechanisms of drug resistance, immune evasion, transmissibility and pathogenicity.

AccessionPRJNA27925
TypeUmbrella Comparative genomics project (Subtype:Comparative genomics)
OrganismPlasmodium falciparum[Taxonomy ID: 5833]
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum
Publications
  • Carlton J et al., "The genome of model malaria parasites, and comparative genomics.", Curr Issues Mol Biol, 2005 Jan;7(1):23-37
  • Hall N et al., "Comparative genomics of malaria parasites.", Curr Opin Genet Dev, 2005 Dec;15(6):609-13
SubmissionRegistration date: 21-Nov-2007
Broad Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)39831
WGS master12
Genomic DNA16
SRA Experiments28
Protein Sequences31318
Publications
PubMed10
PMC2
Other datasets
BioSample13
Assembly13
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes2831
Plasmodium falciparum encompasses the following 13 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Complete genome
Scaffolds
Total

1
12
13
BioProject
accession
Assembly
level
OrganismTitle
PRJNA13173 Complete genomePlasmodium falciparum 3D7Plasmodium falciparum genome sequencing project -Primary submission (Plasmodium falciparum Genome...)
PRJNA20851 ScaffoldsPlasmodium falciparum 7G8Plasmodium falciparum strain 7G8 genome sequence (Broad Institute)
PRJNA20857 ScaffoldsPlasmodium falciparum D10Plasmodium falciparum strain D10 (Broad Institute)
PRJNA20853 ScaffoldsPlasmodium falciparum D6Plasmodium falciparum strain D6 genome sequence (Broad Institute)
PRJNA17829 ScaffoldsPlasmodium falciparum Dd2Plasmodium falciparum strain Dd2 genome sequence (Broad Institute)
List all 13 'Genome sequencing' projects...

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