fruit fly (ID 736147) - BioProject

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Accession: PRJNA736147 ID: 736147

fruit fly

Phylogenomic analyses of the genus Drosophila reveals genomic signals of climate adaptation

We newly sequneced and assembled 15 drosophila species, and 19 transcriptome to assist the annotation. As well, we re-sequenced about 20 individuals for each of 13 species.

Accession	PRJNA736147
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Li F et al., "Phylogenomic analyses of the genus Drosophila reveals genomic signals of climate adaptation.", Mol Ecol Resour, 2022 May;22(4):1559-1581
Submission	Registration date: 8-Jun-2021 BGI-Shenzhen
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6396
WGS master	15
SRA Experiments	367
Protein Sequences	189454
Publications
PubMed	1
PMC	1
Other datasets
BioSample	367
Assembly	15

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

15
15

Assembly	WGS	BioSample	Taxonomy
GCA_021223765.1	JAJJHM000000000	SAMN19610287	Drosophila bipectinata
GCA_021223725.1	JAJJHN000000000	SAMN19610293	Drosophila birchii
GCA_021223745.1	JAJJHO000000000	SAMN19610299	Drosophila bunnanda
GCA_021223785.1	JAJJHP000000000	SAMN19610305	Drosophila immigrans
GCA_021223825.1	JAJJHQ000000000	SAMN19610279	Drosophila ironensis
GCA_021223805.1	JAJJHR000000000	SAMN19610315	Drosophila jambulina
GCA_021223915.1	JAJJHS000000000	SAMN19610320	Drosophila kikkawai
GCA_021223865.1	JAJJHT000000000	SAMN19610328	Drosophila pandora
GCA_021223845.1	JAJJHU000000000	SAMN19610335	Drosophila pseudoananassae
GCA_021223935.1	JAJJHV000000000	SAMN19610345	Drosophila pseudotakahashii
GCA_021223945.1	JAJJHW000000000	SAMN19610354	Drosophila rubida
GCA_021223895.1	JAJJHX000000000	SAMN19610361	Drosophila serrata
GCA_021224005.1	JAJJHY000000000	SAMN19610270	Drosophila setifemur
GCA_021223965.1	JAJJHZ000000000	SAMN19610376	Drosophila sulfurigaster
GCA_021223985.1	JAJJIA000000000	SAMN19610383	Zaprionus bogoriensis

SRA Data Details

Parameter	Value
Data volume, Gbases	1,803
Data volume, Tbytes	0.88

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fruit fly

Phylogenomic analyses of the genus Drosophila reveals genomic signals of climate adaptation

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