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Accession: PRJNA799077 ID: 799077

Drosophila (fruit flies)

Drosophila pseudoobscura and Drosophila affinis Y-replacement lines raw sequence reads

This study characterizes the differences between Y chromosome variants in the D. More...

Accession	PRJNA799077
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Drosophila[Taxonomy ID: 7215] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Publications	Nguyen AH et al., "Transposable element accumulation drives size differences among polymorphic Y Chromosomes in Drosophila.", Genome Res, 2022 Jun;32(6):1074-1088 Published online: Nguyen A et al., "Transposable element accumulation drives size differences among polymorphic Y chromosomes in Drosophila", bioRxiv, 2021;
Submission	Registration date: 20-May-2022 University of California - Berkeley
Relevance	Evolution
Locus Tag Prefix	L3C03

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	3
SRA Experiments	26
Publications
PubMed	1
PMC	1
Other datasets
BioSample	29
Assembly	3

Assembly details:

Assembly level

Number of Assemblies

Contig

3
3

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_023515705.1		JALIQM000000000	SAMN27277785	YM	Drosophila pseudoobscura
GCA_023515665.1		JALIQN000000000	SAMN27277786	YL	Drosophila pseudoobscura
GCA_023515675.1		JALIQL000000000	SAMN27277784	YS (MV25)	Drosophila pseudoobscura

SRA Data Details

Parameter	Value
Data volume, Gbases	185
Data volume, Mbytes	79200

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Drosophila pseudoobscura and Drosophila affinis Y-replacement lines raw sequence reads

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