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Accession: PRJNA974462 ID: 974462

mine metagenome

Metagenome sequencing data from 7 years of soil sampling at the Centralia (PA, USA) coal mine fire

Metagenome dataset generated to examine the recovery and resilience of bacterial community functionality within an anthropogenic disturbance gradients created by the subterranean coal mine fire in Centralia, PA, USA including 7 continuous years of sampling fire-affected, recovered, and reference sites.
AccessionPRJNA974462
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmine metagenome[Taxonomy ID: 2338240]
unclassified sequences; metagenomes; ecological metagenomes; mine metagenome
Grants
  • "CAREER: The consequences of rarity for soil microbiome stability in structure and function" (Grant ID 1749544, National Science Foundation)
SubmissionRegistration date: 5-Mar-2024
Michigan State University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)69
SRA Experiments69
Other datasets
BioSample69
Assembly69
Assembly details:
Assembly levelNumber of Assemblies
69
69
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_037024615.1ScaffoldJBAIGI000000000SAMN35217902
Cen11_13102020_R1_S12
GCA_037024535.1ScaffoldJBAIGN000000000SAMN35217907
Cen14_02102018_R1_S17
GCA_037024695.1ScaffoldJBAIGE000000000SAMN35217898
Cen11_11102016_R1_S8
GCA_037024575.1ScaffoldJBAIGK000000000SAMN35217904
Cen14_12102015_R1_S14
GCA_037024595.1ScaffoldJBAIGJ000000000SAMN35217903
Cen11_06102021_R1_S13
GCA_037024555.1ScaffoldJBAIGL000000000SAMN35217905
Cen14_11102016_R1_S15
GCA_037024515.1ScaffoldJBAIGO000000000SAMN35217908
Cen14_06102019_R1_S18
GCA_037024495.1ScaffoldJBAIGM000000000SAMN35217906
Cen14_19102017_R1_S16
GCA_037024455.1ScaffoldJBAIGR000000000SAMN35217911
Cen15_12102015_R1_S21
GCA_037024475.1ScaffoldJBAIGQ000000000SAMN35217910
Cen14_05102021_R1_S20
GCA_037024435.1ScaffoldJBAIGS000000000SAMN35217912
Cen15_11102016_R1_S22
GCA_037024415.1ScaffoldJBAIGP000000000SAMN35217909
Cen14_13102020_R1_S19
GCA_037024395.1ScaffoldJBAIGV000000000SAMN35217915
Cen15_06102019_R1_S25
GCA_037024775.1ScaffoldJBAIGA000000000SAMN35217894
Cen08_04102018_R1_S4
GCA_037024735.1ScaffoldJBAIGD000000000SAMN35217897
Cen11_12102015_R1_S7
GCA_037024675.1ScaffoldJBAIGF000000000SAMN35217899
Cen11_20102017_R1_S9
GCA_037024715.1ScaffoldJBAIGC000000000SAMN35217896
Cen08_06102021_R1_S6
GCA_037024755.1ScaffoldJBAIGB000000000SAMN35217895
Cen08_15102020_R1_S5
GCA_037024635.1ScaffoldJBAIGG000000000SAMN35217900
Cen11_03102018_R1_S10
GCA_037024655.1ScaffoldJBAIGH000000000SAMN35217901
Cen11_06102019_R1_S11
GCA_037024795.1ScaffoldJBAIFZ000000000SAMN35217893
Cen08_21102017_R1_S3
GCA_037024815.1ScaffoldJBAIFX000000000SAMN35217891
Cen08_13102015_R1_S1
GCA_037024835.1ScaffoldJBAIFY000000000SAMN35217892
Cen08_12102016_R1_S2
GCA_037024865.1ScaffoldJBAIIK000000000SAMN35217956
Cen23_04102018_R1_S66
GCA_037024905.1ScaffoldJBAIIN000000000SAMN35217959
Cen23_06102021_R1_S69
GCA_037024885.1ScaffoldJBAIIM000000000SAMN35217958
Cen23_15102020_R1_S68
GCA_037024965.1ScaffoldJBAIII000000000SAMN35217954
Cen23_12102016_R1_S64
GCA_037024985.1ScaffoldJBAIIH000000000SAMN35217953
Cen23_13102015_R1_S63
GCA_037024945.1ScaffoldJBAIIJ000000000SAMN35217955
Cen23_21102017_R1_S65
GCA_037024925.1ScaffoldJBAIIL000000000SAMN35217957
Cen23_07102019_R1_S67
GCA_037025025.1ScaffoldJBAIIF000000000SAMN35217951
Cen22_13102020_R1_S61
GCA_037025005.1ScaffoldJBAIIG000000000SAMN35217952
Cen22_07102021_R1_S62
GCA_037025065.1ScaffoldJBAIIB000000000SAMN35217947
Cen22_11102016_R1_S57
GCA_037025045.1ScaffoldJBAIIE000000000SAMN35217950
Cen22_06102019_R1_S60
GCA_037025405.1ScaffoldJBAIHL000000000SAMN35217931
Cen17_05102021_R1_S41
GCA_037025245.1ScaffoldJBAIHU000000000SAMN35217940
Cen21_11102016_R1_S50
GCA_037025305.1ScaffoldJBAIHR000000000SAMN35217937
Cen19_13102020_R1_S47
GCA_037025265.1ScaffoldJBAIHT000000000SAMN35217939
Cen21_12102015_R1_S49
GCA_037025465.1ScaffoldJBAIHJ000000000SAMN35217929
Cen17_06102019_R1_S39
GCA_037025505.1ScaffoldJBAIHH000000000SAMN35217927
Cen17_21102017_R1_S37
GCA_037025485.1ScaffoldJBAIHI000000000SAMN35217928
Cen17_03102018_R1_S38
GCA_037025445.1ScaffoldJBAIHK000000000SAMN35217930
Cen17_14102020_R1_S40
GCA_037025345.1ScaffoldJBAIHO000000000SAMN35217934
Cen19_19102017_R1_S44
GCA_037025325.1ScaffoldJBAIHS000000000SAMN35217938
Cen19_05102021_R1_S48
GCA_037025525.1ScaffoldJBAIHF000000000SAMN35217925
Cen17_12102015_R1_S35
GCA_037025365.1ScaffoldJBAIHP000000000SAMN35217935
Cen19_02102018_R1_S45
GCA_037025425.1ScaffoldJBAIHM000000000SAMN35217932
Cen19_12102015_R1_S42
GCA_037025645.1ScaffoldJBAIHA000000000SAMN35217920
Cen16_19102017_R1_S30
GCA_037025565.1ScaffoldJBAIHD000000000SAMN35217923
Cen16_15102020_R1_S33
GCA_037025545.1ScaffoldJBAIHG000000000SAMN35217926
Cen17_12102016_R1_S36
GCA_037025385.1ScaffoldJBAIHN000000000SAMN35217933
Cen19_11102016_R1_S43
GCA_037025125.1ScaffoldJBAIIA000000000SAMN35217946
Cen22_12102015_R1_S56
GCA_037025145.1ScaffoldJBAIHZ000000000SAMN35217945
Cen21_05102021_R1_S55
GCA_037025105.1ScaffoldJBAIID000000000SAMN35217949
Cen22_03102018_R1_S59
GCA_037025085.1ScaffoldJBAIIC000000000SAMN35217948
Cen22_20102017_R1_S58
GCA_037025225.1ScaffoldJBAIHX000000000SAMN35217943
Cen21_06102019_R1_S53
GCA_037025285.1ScaffoldJBAIHQ000000000SAMN35217936
Cen19_06102019_R1_S46
GCA_037025185.1ScaffoldJBAIHV000000000SAMN35217941
Cen21_19102017_R1_S51
GCA_037025205.1ScaffoldJBAIHW000000000SAMN35217942
Cen21_02102018_R1_S52
GCA_037025165.1ScaffoldJBAIHY000000000SAMN35217944
Cen21_13102020_R1_S54
GCA_037025765.1ScaffoldJBAIGT000000000SAMN35217913
Cen15_19102017_R1_S23
GCA_037025745.1ScaffoldJBAIGU000000000SAMN35217914
Cen15_02102018_R1_S24
GCA_037025725.1ScaffoldJBAIGW000000000SAMN35217916
Cen15_13102020_R1_S26
GCA_037025705.1ScaffoldJBAIGY000000000SAMN35217918
Cen16_12102015_R1_S28
GCA_037025685.1ScaffoldJBAIGZ000000000SAMN35217919
Cen16_11102016_R1_S29
GCA_037025605.1ScaffoldJBAIHC000000000SAMN35217922
Cen16_06102019_R1_S32
GCA_037025665.1ScaffoldJBAIGX000000000SAMN35217917
Cen15_05102021_R1_S27
GCA_037025585.1ScaffoldJBAIHE000000000SAMN35217924
Cen16_05102021_R1_S34
GCA_037025625.1ScaffoldJBAIHB000000000SAMN35217921
Cen16_02102018_R1_S31
SRA Data Details
ParameterValue
Data volume, Gbases1,685
Data volume, Tbytes0.54

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